Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 60.38 | 58.82 |
| GSMUA_Achr10P... | Banana | nucleus | 54.34 | 50.53 |
| GSMUA_Achr11P... | Banana | nucleus | 52.45 | 46.96 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 24.15 | 39.75 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 21.13 | 30.94 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 31.7 | 30.88 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 25.66 | 30.36 |
| VIT_06s0004g03420.t01 | Wine grape | nucleus | 33.58 | 30.07 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 33.21 | 29.53 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 32.08 | 29.21 |
| KRH24943 | Soybean | nucleus | 33.58 | 29.18 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 29.06 | 28.95 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 26.79 | 28.74 |
| GSMUA_Achr11P... | Banana | nucleus | 31.7 | 28.57 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 29.43 | 28.47 |
| KRG89059 | Soybean | nucleus | 32.45 | 27.74 |
| KRH22943 | Soybean | nucleus | 29.81 | 27.72 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 20.38 | 27.69 |
| GSMUA_Achr11P... | Banana | nucleus | 28.3 | 27.57 |
| CDY53379 | Canola | nucleus | 22.64 | 27.4 |
| KRH10402 | Soybean | nucleus | 29.43 | 27.37 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 25.66 | 27.2 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 28.3 | 26.79 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 29.43 | 26.71 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 25.66 | 26.46 |
| PGSC0003DMT400019416 | Potato | nucleus | 29.81 | 26.16 |
| Solyc06g075370.2.1 | Tomato | nucleus | 29.81 | 26.07 |
| PGSC0003DMT400065271 | Potato | nucleus | 28.68 | 25.42 |
| Solyc11g072500.1.1 | Tomato | nucleus | 27.17 | 25.26 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 21.13 | 25.23 |
| GSMUA_Achr10P... | Banana | nucleus | 24.53 | 25.19 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 26.04 | 24.91 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 26.42 | 24.82 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 21.89 | 24.47 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 25.28 | 24.36 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 19.25 | 23.5 |
| GSMUA_Achr10P... | Banana | nucleus | 25.66 | 23.45 |
| CDX77184 | Canola | nucleus | 22.64 | 23.44 |
| Bra035696.1-P | Field mustard | nucleus | 22.64 | 23.44 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 28.3 | 22.59 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 21.89 | 22.57 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 21.51 | 22.01 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 25.28 | 21.9 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.02 | 21.86 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 22.26 | 21.85 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 29.81 | 21.7 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 27.17 | 21.69 |
| AT2G28510.1 | Thale cress | nucleus | 23.02 | 21.18 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 22.64 | 21.05 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 28.68 | 20.99 |
| PGSC0003DMT400075051 | Potato | nucleus | 23.02 | 20.96 |
| GSMUA_Achr11P... | Banana | nucleus | 28.3 | 20.89 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 25.66 | 20.61 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 23.77 | 20.52 |
| Solyc06g005130.2.1 | Tomato | nucleus | 23.77 | 20.45 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 18.87 | 20.24 |
| GSMUA_Achr10P... | Banana | nucleus | 24.91 | 19.58 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 24.91 | 19.41 |
| GSMUA_Achr10P... | Banana | nucleus | 21.13 | 19.18 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 30.94 | 18.98 |
| GSMUA_Achr10P... | Banana | nucleus | 24.91 | 18.97 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 24.15 | 18.66 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 21.13 | 18.54 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 22.64 | 18.4 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 21.51 | 17.98 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 22.64 | 16.9 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G23850_001 | EnsemblPlants:GSMUA_Achr11P23850_001 | EnsemblPlants:GSMUA_Achr11T23850_001 |
| InterPro:IPR003851 | UniProt:M0RUW5 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | UniParc:UPI000294AD9A | InterPro:Znf_Dof | SEG:seg | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr11G23850_001]
Coordinates
chr11:-:23612441..23613238
Molecular Weight (calculated)
28801.5 Da
IEP (calculated)
7.624
GRAVY (calculated)
-0.674
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSRGLEEVV ACPKTQQQQQ QQDRKARPHP EHALQCPRCA STNTKFCYYN NYSLSQPRYF CKGCRRYWTQ GGSLRNVPVG GGCRKTKRSS SSSSKKAAPF
101: LVPSPLSHDP SDDLTSLQKP LPMKQFGSDH ENGHNFLVGN TNTDPFSFLV NDSDPMPSAP TPTKGFLDYL RNGLVDISSP SSFSNIDYDY GLGTSGSWGM
201: PTGAGLSGAT AGTTTCQGSC KPMDGGDGHV EMSLLWQDGS MDSERDYCWN GVGPSWQGLI NSSLL
101: LVPSPLSHDP SDDLTSLQKP LPMKQFGSDH ENGHNFLVGN TNTDPFSFLV NDSDPMPSAP TPTKGFLDYL RNGLVDISSP SSFSNIDYDY GLGTSGSWGM
201: PTGAGLSGAT AGTTTCQGSC KPMDGGDGHV EMSLLWQDGS MDSERDYCWN GVGPSWQGLI NSSLL
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.