Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075051 | Potato | nucleus | 82.14 | 86.94 |
| CDY53379 | Canola | nucleus | 33.44 | 47.03 |
| Bra035696.1-P | Field mustard | nucleus | 36.04 | 43.36 |
| CDX77184 | Canola | nucleus | 36.04 | 43.36 |
| AT2G28510.1 | Thale cress | nucleus | 38.64 | 41.32 |
| Solyc04g070960.1.1 | Tomato | nucleus | 22.73 | 26.22 |
| Solyc11g072500.1.1 | Tomato | nucleus | 23.05 | 24.91 |
| Solyc03g082840.2.1 | Tomato | nucleus | 20.78 | 24.81 |
| VIT_06s0004g03420.t01 | Wine grape | nucleus | 23.7 | 24.66 |
| Solyc06g075370.2.1 | Tomato | nucleus | 24.03 | 24.42 |
| GSMUA_Achr10P... | Banana | nucleus | 21.1 | 23.9 |
| GSMUA_Achr11P... | Banana | nucleus | 20.45 | 23.77 |
| KRH10402 | Soybean | nucleus | 21.43 | 23.16 |
| KRH22943 | Soybean | nucleus | 21.43 | 23.16 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 20.45 | 22.99 |
| Solyc10g009360.2.1 | Tomato | nucleus | 19.48 | 22.99 |
| KRH24943 | Soybean | nucleus | 22.73 | 22.95 |
| Solyc01g096120.2.1 | Tomato | nucleus | 20.45 | 22.83 |
| GSMUA_Achr10P... | Banana | nucleus | 21.1 | 22.81 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 21.1 | 22.34 |
| KRG89059 | Soybean | nucleus | 22.4 | 22.26 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 19.16 | 21.69 |
| GSMUA_Achr11P... | Banana | nucleus | 20.78 | 21.62 |
| Solyc02g090310.1.1 | Tomato | nucleus | 17.86 | 21.15 |
| Solyc02g077960.1.1 | Tomato | nucleus | 20.13 | 20.74 |
| Solyc06g071480.2.1 | Tomato | nucleus | 18.51 | 20.43 |
| Solyc08g082910.1.1 | Tomato | nucleus | 19.81 | 19.18 |
| Solyc03g112930.2.1 | Tomato | nucleus | 19.48 | 18.02 |
| Solyc02g078620.1.1 | Tomato | nucleus | 16.56 | 17.96 |
| Solyc10g086440.1.1 | Tomato | nucleus | 20.13 | 17.13 |
| Solyc05g054510.1.1 | Tomato | nucleus | 16.23 | 16.78 |
| Solyc06g076030.2.1 | Tomato | nucleus | 17.86 | 16.47 |
| Solyc09g010680.2.1 | Tomato | nucleus | 21.1 | 16.33 |
| Solyc11g066050.1.1 | Tomato | nucleus | 16.88 | 16.3 |
| Solyc11g010940.1.1 | Tomato | nucleus | 18.83 | 15.47 |
| Solyc02g077950.1.1 | Tomato | nucleus | 18.83 | 15.3 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | UniProt:K4C2Z7 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF69 | EnsemblPlantsGene:Solyc06g005130.2 |
| EnsemblPlants:Solyc06g005130.2.1 | UniParc:UPI0002765B1C | InterPro:Znf_Dof | SEG:seg | : | : |
Description
Dof zinc finger protein DOF2.1 [Source:Projected from Arabidopsis thaliana (AT2G28510) UniProtKB/Swiss-Prot;Acc:Q8LE43]
Coordinates
chr6:-:157308..159136
Molecular Weight (calculated)
34622.1 Da
IEP (calculated)
6.751
GRAVY (calculated)
-0.795
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMDSSNAQN YHQEMSSQTL ESMLACTKPQ QEKKPRPQDE VQKCPRCDSS NTKFCYYNNY SLTQPRYFCK SCRRYWTKGG TLRNVPVGGG CRKKQRSSSK
101: RSSPDNQSLM TTTTYPNNQI SPLTQFSYDP NDLSLAFSRL QNQESGQLVC PKLQRTVRTE SIFSDSLYLT NFGNSVCHDV FENRDMCTSS SEAFSRAGFL
201: DTLSDGLLDA SNGFLHHNLY YYGSNGNNGN NMGHVESASG EMITNFDQEV RSGALKEEIM CSDNKILLGY PWQINGDGNV ADFEYSNRQN WNGLGVPSGH
301: GLLNSPLM
101: RSSPDNQSLM TTTTYPNNQI SPLTQFSYDP NDLSLAFSRL QNQESGQLVC PKLQRTVRTE SIFSDSLYLT NFGNSVCHDV FENRDMCTSS SEAFSRAGFL
201: DTLSDGLLDA SNGFLHHNLY YYGSNGNNGN NMGHVESASG EMITNFDQEV RSGALKEEIM CSDNKILLGY PWQINGDGNV ADFEYSNRQN WNGLGVPSGH
301: GLLNSPLM
001: MDPEQEISNE TLETILVSST KGSNNNNKKM EEEMKKKVSR GELGGEAQNC PRCESPNTKF CYYNNYSLSQ PRYFCKSCRR YWTKGGTLRN VPVGGGCRRN
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
Arabidopsis Description
DOF2.1Dof zinc finger protein DOF2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LE43]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.