Factsheet for Solyc01g096120.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000349	Potato	nucleus	87.32	90.94
Solyc10g009360.2.1	Tomato	nucleus	52.9	55.94
GSMUA_Achr4P30470_001	Banana	nucleus	24.64	42.24
Solyc03g082840.2.1	Tomato	nucleus	38.04	40.7
VIT_15s0046g00150.t01	Wine grape	nucleus	46.38	40.51
Solyc08g082910.1.1	Tomato	nucleus	44.57	38.68
GSMUA_Achr11P...	Banana	nucleus	36.96	34.69
GSMUA_Achr1P03930_001	Banana	nucleus	27.17	29.18
Solyc06g075370.2.1	Tomato	nucleus	28.62	26.07
Solyc11g072500.1.1	Tomato	nucleus	26.09	25.26
Solyc06g071480.2.1	Tomato	nucleus	25.36	25.09
Solyc03g112930.2.1	Tomato	nucleus	27.54	22.82
Solyc02g077960.1.1	Tomato	nucleus	24.28	22.41
Solyc04g070960.1.1	Tomato	nucleus	20.29	20.97
Solyc02g090310.1.1	Tomato	nucleus	19.57	20.77
Solyc06g005130.2.1	Tomato	nucleus	22.83	20.45
Solyc02g077950.1.1	Tomato	nucleus	26.45	19.26
Solyc06g076030.2.1	Tomato	nucleus	22.46	18.56
Solyc05g054510.1.1	Tomato	nucleus	19.93	18.46
Solyc02g078620.1.1	Tomato	nucleus	18.84	18.31
Solyc11g010940.1.1	Tomato	nucleus	23.19	17.07
Solyc11g066050.1.1	Tomato	nucleus	19.57	16.93
Solyc10g086440.1.1	Tomato	nucleus	21.01	16.02
Solyc09g010680.2.1	Tomato	nucleus	22.1	15.33

Protein Annotations

MapMan:15.5.1.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	UniProt:K4B001	PFAM:PD007478
PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF42	EnsemblPlantsGene:Solyc01g096120.2
EnsemblPlants:Solyc01g096120.2.1	UniParc:UPI00027676C8	InterPro:Znf_Dof	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:+:87235743..87237974

Molecular Weight (calculated)

29844.7 Da

IEP (calculated)

9.559

GRAVY (calculated)

-0.647

Length

276 amino acids

Sequence
(BLAST)

001: MESTQWSTHE EIGVVKSSMG AEIMNKKVRP VKDGAINCPR CNSINTKFCY YNNYSLTQPR YFCKTCRRYW TEGGTLRNVP VGGGSRKNKR LSSSSSSSQK
101: LPDLNPNPTS HHQNPNNIVI GSNQDLTLGF RTVPQDHHTS FHGVIPQFLE FPKMDGSNNH LGSRTGIASR GFTSFISSAS TPDLNALYNS GFPFQEIKPS
201: AGNADHAASL SNSNYSSGGP GGLENGSGAR IMFPLGGLKQ LSSTNQVDHL TKGQENNNST AGLYWSGMIS GTGGSW

Best Arabidopsis Sequence Match ( AT3G61850.5 )
(BLAST)

001: MINVKPMEQM ISSTNNNTPQ QQPTFIATNT RPNATASNGG SGGNTNNTAT METRKARPQE KVNCPRCNST NTKFCYYNNY SLTQPRYFCK GCRRYWTEGG
101: SLRNVPVGGS SRKNKRSSTP LASPSNPKLP DLNPPILFSS QIPNKSNKDL NLLSFPVMQD HHHHGMSHFF HMPKIENNNT SSSIYASSSP VSALELLRSN
201: GVSSRGMNTF LPGQMMDSNS VLYSSLGFPT MPDYKQSNNN LSFSIDHHQG IGHNTINSNQ RAQDNNDDMN GASRVLFPFS DMKELSSTTQ EKSHGNNTYW
301: NGMFSNTGGS SW

Arabidopsis Description

DAG1Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:B3H6D1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.