Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400002060 | Potato | nucleus | 97.75 | 98.12 |
| KRH53419 | Soybean | nucleus | 38.2 | 35.29 |
| KRH64521 | Soybean | nucleus | 37.45 | 34.6 |
| CDY50231 | Canola | nucleus | 29.59 | 31.23 |
| CDY00373 | Canola | nucleus | 30.34 | 31.15 |
| CDY04620 | Canola | nucleus | 29.59 | 31.1 |
| Bra012277.1-P | Field mustard | nucleus | 30.34 | 31.03 |
| CDY61064 | Canola | nucleus | 30.34 | 31.03 |
| Bra017906.1-P | Field mustard | nucleus | 29.21 | 30.83 |
| AT1G21340.1 | Thale cress | nucleus | 29.96 | 30.77 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 31.84 | 30.25 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 24.72 | 26.4 |
| Solyc03g082840.2.1 | Tomato | nucleus | 23.22 | 24.03 |
| Solyc06g071480.2.1 | Tomato | nucleus | 24.34 | 23.3 |
| Solyc06g005130.2.1 | Tomato | nucleus | 26.22 | 22.73 |
| Solyc11g072500.1.1 | Tomato | nucleus | 23.97 | 22.46 |
| Solyc10g009360.2.1 | Tomato | nucleus | 21.72 | 22.22 |
| Solyc06g075370.2.1 | Tomato | nucleus | 25.09 | 22.11 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 24.72 | 20.89 |
| TraesCS1A01G275000.1 | Wheat | nucleus | 24.34 | 20.57 |
| Solyc01g096120.2.1 | Tomato | nucleus | 20.97 | 20.29 |
| Os01t0865800-00 | Rice | nucleus | 24.72 | 20.06 |
| Solyc02g090310.1.1 | Tomato | nucleus | 19.48 | 20.0 |
| TraesCS3A01G377000.1 | Wheat | nucleus | 24.34 | 19.64 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 23.97 | 19.57 |
| Solyc02g077960.1.1 | Tomato | nucleus | 21.72 | 19.4 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 23.97 | 19.34 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 23.97 | 19.34 |
| Os05t0440000-00 | Rice | nucleus | 23.6 | 19.27 |
| Solyc08g082910.1.1 | Tomato | nucleus | 22.85 | 19.18 |
| EES03938 | Sorghum | nucleus | 23.97 | 19.1 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 23.6 | 19.03 |
| Zm00001d042736_P001 | Maize | nucleus | 22.85 | 18.77 |
| Solyc03g112930.2.1 | Tomato | nucleus | 23.22 | 18.62 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 23.97 | 18.6 |
| EES18302 | Sorghum | plastid | 24.34 | 17.76 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 24.72 | 17.51 |
| Zm00001d012280_P001 | Maize | nucleus | 22.1 | 17.46 |
| Solyc10g086440.1.1 | Tomato | nucleus | 23.22 | 17.13 |
| Solyc06g076030.2.1 | Tomato | nucleus | 20.97 | 16.77 |
| Solyc05g054510.1.1 | Tomato | nucleus | 18.35 | 16.44 |
| Solyc11g066050.1.1 | Tomato | nucleus | 19.48 | 16.3 |
| Solyc02g078620.1.1 | Tomato | nucleus | 17.23 | 16.2 |
| Solyc11g010940.1.1 | Tomato | nucleus | 22.47 | 16.0 |
| Solyc09g010680.2.1 | Tomato | nucleus | 22.47 | 15.08 |
| Solyc02g077950.1.1 | Tomato | nucleus | 20.6 | 14.51 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | UniProt:K4BT88 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF74 |
| EnsemblPlantsGene:Solyc04g070960.1 | EnsemblPlants:Solyc04g070960.1.1 | UniParc:UPI000276664C | InterPro:Znf_Dof | SEG:seg | : |
Description
Dof zinc finger protein DOF1.2 [Source:Projected from Arabidopsis thaliana (AT1G21340) UniProtKB/Swiss-Prot;Acc:P68349]
Coordinates
chr4:-:57753562..57754365
Molecular Weight (calculated)
30426.7 Da
IEP (calculated)
4.571
GRAVY (calculated)
-0.884
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPYHPRPMI MMERTRKSNI EQAPNCPRCA STNTKFCYYN NYSLSQPRYF CKACRRYWTK GGSLRNVPVG GGCRKSRRSR STRKDDNTLQ TSSPALEGAP
101: GAHDIDLADV FAKYLNQGTN NDHDDNIIIQ ESQDYSSIGA SLSNSPSSDS LVNNPTSFEN ESLLDNFQDY PCGNFLQEEQ GAQINQDFLD FNASFLEMQA
201: ILGQEEDQFD HYNTSNFEWQ PMMQFQDFGS ILELDDHQLT KNSTTNLASH DNNNNNNYSS FDLSNYI
101: GAHDIDLADV FAKYLNQGTN NDHDDNIIIQ ESQDYSSIGA SLSNSPSSDS LVNNPTSFEN ESLLDNFQDY PCGNFLQEEQ GAQINQDFLD FNASFLEMQA
201: ILGQEEDQFD HYNTSNFEWQ PMMQFQDFGS ILELDDHQLT KNSTTNLASH DNNNNNNYSS FDLSNYI
001: MERAEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKSRRP KSSSGNNTKT SLTANSGNPG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.