Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G284300.1 | Wheat | nucleus | 93.04 | 93.04 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 94.3 | 79.05 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 84.18 | 77.33 |
| Os05t0440000-00 | Rice | nucleus | 68.04 | 65.75 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 61.39 | 59.33 |
| EES18302 | Sorghum | plastid | 62.03 | 53.55 |
| TraesCS3A01G377000.1 | Wheat | nucleus | 54.43 | 51.96 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 22.47 | 28.4 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 22.15 | 24.91 |
| CDY50231 | Canola | nucleus | 19.94 | 24.9 |
| Bra017906.1-P | Field mustard | nucleus | 19.94 | 24.9 |
| CDY04620 | Canola | nucleus | 19.94 | 24.8 |
| PGSC0003DMT400002060 | Potato | nucleus | 20.57 | 24.44 |
| Solyc04g070960.1.1 | Tomato | nucleus | 20.57 | 24.34 |
| CDY00373 | Canola | nucleus | 19.94 | 24.23 |
| AT1G21340.1 | Thale cress | nucleus | 19.94 | 24.23 |
| KRH64521 | Soybean | nucleus | 22.15 | 24.22 |
| Bra012277.1-P | Field mustard | nucleus | 19.62 | 23.75 |
| CDY61064 | Canola | nucleus | 19.62 | 23.75 |
| KRH53419 | Soybean | nucleus | 21.52 | 23.53 |
| TraesCS3A01G539000.1 | Wheat | nucleus | 18.35 | 21.56 |
| TraesCS7A01G213400.1 | Wheat | nucleus | 18.99 | 21.13 |
| TraesCS6A01G287700.1 | Wheat | nucleus | 18.99 | 20.62 |
| TraesCS6A01G274000.1 | Wheat | nucleus | 19.94 | 20.59 |
| TraesCS2A01G402200.1 | Wheat | nucleus | 23.73 | 19.84 |
| TraesCS5A01G078100.1 | Wheat | nucleus | 20.25 | 18.71 |
| TraesCS1A01G035200.1 | Wheat | nucleus | 21.2 | 18.56 |
| TraesCS2A01G079200.1 | Wheat | nucleus | 18.99 | 18.4 |
| TraesCS6A01G255500.1 | Wheat | nucleus | 22.78 | 18.37 |
| TraesCS5A01G155900.1 | Wheat | nucleus | 18.99 | 17.75 |
| TraesCS4A01G097800.1 | Wheat | nucleus | 20.89 | 17.23 |
| TraesCS3A01G532000.1 | Wheat | nucleus | 19.62 | 16.67 |
| TraesCS3A01G532200.1 | Wheat | nucleus | 18.67 | 16.62 |
| TraesCS2A01G225900.1 | Wheat | nucleus, plastid | 18.67 | 16.57 |
| TraesCS5A01G401800.1 | Wheat | nucleus | 18.99 | 15.75 |
| TraesCS3A01G532100.1 | Wheat | nucleus | 18.67 | 15.57 |
| TraesCS5A01G479400.1 | Wheat | nucleus | 21.84 | 14.78 |
| TraesCS6A01G233700.1 | Wheat | cytosol, mitochondrion, nucleus | 5.38 | 7.83 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G275000.1 | EnsemblPlantsGene:TraesCS1A01G275000 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF72 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr1A:+:469309705..469310655
Molecular Weight (calculated)
33511.3 Da
IEP (calculated)
5.176
GRAVY (calculated)
-0.399
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSHCESML AYAAAAGRRA MLVDPRRYRP NVEVAPNCPR CDSPNTKFCY YNNYSLSQPR YFCKGCRRYW TKGGSLRNVP VGGGCRKNRR GKPVRSMAEA
101: DTASPSHGAA VFSHRFHGPV RPDLLLEGMV GNPAELAQPE PGEAEKPAGA ADGPTIDLAL LYSKFLSQQP LAEQGAVVPE SAGPSSGSST EMSPPALSSP
201: GQHGLGEICG PASSTEPSAT TMLQCADARA HALGEFNFSV DQSCYDSLGL PTDGADLTML PPAWDQEAKY EPFSSLPDQE DAMSLHDAVP AGDDVWSKVL
301: GCQGLEAALS AGLDRC
101: DTASPSHGAA VFSHRFHGPV RPDLLLEGMV GNPAELAQPE PGEAEKPAGA ADGPTIDLAL LYSKFLSQQP LAEQGAVVPE SAGPSSGSST EMSPPALSSP
201: GQHGLGEICG PASSTEPSAT TMLQCADARA HALGEFNFSV DQSCYDSLGL PTDGADLTML PPAWDQEAKY EPFSSLPDQE DAMSLHDAVP AGDDVWSKVL
301: GCQGLEAALS AGLDRC
001: MDPEQEISNE TLETILVSST KGSNNNNKKM EEEMKKKVSR GELGGEAQNC PRCESPNTKF CYYNNYSLSQ PRYFCKSCRR YWTKGGTLRN VPVGGGCRRN
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
Arabidopsis Description
DOF2.1Dof zinc finger protein DOF2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LE43]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.