Factsheet for TraesCS5A01G078100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G087600.3	Wheat	nucleus	98.25	97.67
TraesCS5D01G093800.2	Wheat	nucleus	98.25	97.39
HORVU5Hr1G021290.1	Barley	nucleus	97.95	97.1
Os12t0569900-01	Rice	nucleus	78.07	76.72
OQU79380	Sorghum	nucleus, vacuole	72.51	72.94
Zm00001d041549_P001	Maize	nucleus	72.22	72.01
GSMUA_Achr10P...	Banana	nucleus	35.38	35.91
PGSC0003DMT400078164	Potato	nucleus	33.04	35.31
KRH46814	Soybean	nucleus	36.26	33.79
KRG99864	Soybean	nucleus	35.67	33.61
Solyc06g076030.2.1	Tomato	nucleus	32.46	33.23
TraesCS4A01G097800.1	Wheat	nucleus	33.92	30.29
KRH70477	Soybean	nucleus	30.7	28.3
TraesCS1A01G035200.1	Wheat	nucleus	28.95	27.42
TraesCS2A01G079200.1	Wheat	nucleus	26.02	27.3
TraesCS5A01G479400.1	Wheat	nucleus	37.13	27.19
TraesCS2A01G225900.1	Wheat	nucleus, plastid	27.49	26.4
TraesCS3A01G532000.1	Wheat	nucleus	28.66	26.34
TraesCS3A01G539000.1	Wheat	nucleus	20.47	26.02
TraesCS2A01G402200.1	Wheat	nucleus	26.02	23.55
TraesCS6A01G274000.1	Wheat	nucleus	21.05	23.53
TraesCS3A01G532200.1	Wheat	nucleus	23.98	23.1
TraesCS7A01G213400.1	Wheat	nucleus	18.71	22.54
TraesCS6A01G287700.1	Wheat	nucleus	18.71	21.99
TraesCS3A01G532100.1	Wheat	nucleus	24.27	21.9
TraesCS6A01G255500.1	Wheat	nucleus	24.56	21.43
TraesCS1A01G275000.1	Wheat	nucleus	18.71	20.25
TraesCS3A01G377000.1	Wheat	nucleus	18.71	19.34
TraesCS5A01G401800.1	Wheat	nucleus	20.18	18.11
TraesCS5A01G155900.1	Wheat	nucleus	17.84	18.05
TraesCS6A01G233700.1	Wheat	cytosol, mitochondrion, nucleus	7.02	11.06

Protein Annotations

EnsemblPlants:TraesCS5A01G078100.1	EnsemblPlantsGene:TraesCS5A01G078100	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	InterPro:Znf_Dof	PANTHER:PTHR31992	PANTHER:PTHR31992:SF75	PFAM:PD007478	PFAM:PF02701
PFscan:PS50884	ScanProsite:PS01361	SEG:seg	MapMan:15.5.1.5	:	:

Description

No Description!

Coordinates

chr5A:+:95868642..95869933

Molecular Weight (calculated)

35272.2 Da

IEP (calculated)

8.695

GRAVY (calculated)

-0.338

Length

342 amino acids

Sequence
(BLAST)

001: MVFSSFPIFL DPPSWTQMQQ QPLQCFMGGG GGSEHQHHQL IPASSGQLAP LPDVPGSTAA SAPAVAGSSS ASLQLVVSGQ QGNPGEQPPR PSVSMTERAR
101: MARVPLPEPG TLRCPRCDSA NTKFCYFNNY SLSQPRHFCK ACRRYWTRGG ALRNVPVGGG CRRNTKRSSK KSSRQGQGGG GAVAAATSSS STTSTSTTTS
201: AAAATAADVI ASMQALPHHL GGLPAAAALE ASLEGYHSHS HHQHHNLPFL PPQFLQQGLH GYHFADGDIG SQLADGFPRG VASGLLAQLA SIKMEEHGAG
301: AAGAGGGFVG GHEQYWPGSG GGGGWPTEFL SGFSSSSSGN VM

Best Arabidopsis Sequence Match ( AT2G28810.1 )
(BLAST)

001: MVFSSVSSFL DPPINWPQSA NPNNHPHHHQ LQENGSLVSG HHQVLSHHFP QNPNPNHHHV ETAAATTVDP SSLNGQAAER ARLAKNSQPP EGALKCPRCD
101: SANTKFCYFN NYNLTQPRHF CKACRRYWTR GGALRNVPVG GGCRRNKKGK SGNSKSSSSS QNKQSTSMVN ATSPTNTSNV QLQTNSQFPF LPTLQNLTQL
201: GGIGLNLAAI NGNNGGNGNT SSSFLNDLGF FHGGNTSGPV MGNNNENNLM TSLGSSSHFA LFDRTMGLYN FPNEVNMGLS SIGATRVSQT AQVKMEDNHL
301: GNISRPVSGL TSPGNQSNQY WTGQGLPGSS SNDHHHQHLM

Arabidopsis Description

DOF2.2Dof zinc finger protein DOF2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.