Factsheet for TraesCS5B01G087600.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G078100.1	Wheat	nucleus	97.67	98.25
HORVU5Hr1G021290.1	Barley	nucleus	98.26	97.97
TraesCS5D01G093800.2	Wheat	nucleus	98.26	97.97
Os12t0569900-01	Rice	nucleus	77.33	76.44
OQU79380	Sorghum	nucleus, vacuole	71.8	72.65
Zm00001d041549_P001	Maize	nucleus	71.51	71.72
GSMUA_Achr10P...	Banana	nucleus	35.47	36.2
PGSC0003DMT400078164	Potato	nucleus	33.14	35.62
KRH46814	Soybean	nucleus	36.34	34.06
KRG99864	Soybean	nucleus	35.76	33.88
Solyc06g076030.2.1	Tomato	nucleus	32.56	33.53
TraesCS4B01G206800.1	Wheat	nucleus	34.01	30.95
KRH70477	Soybean	nucleus	30.81	28.57
TraesCS1B01G045000.3	Wheat	nucleus	29.94	28.07
TraesCS5B01G492600.1	Wheat	nucleus	36.05	27.43
TraesCS2B01G094000.1	Wheat	nucleus	25.87	26.97
TraesCS3B01G608800.1	Wheat	nucleus	29.36	26.86
TraesCS2B01G249200.1	Wheat	nucleus, plastid	27.33	26.48
TraesCS3B01G608900.1	Wheat	nucleus	26.16	25.35
TraesCS3B01G609100.1	Wheat	nucleus	24.71	24.5
TraesCS3B01G609000.1	Wheat	nucleus	25.0	24.43
TraesCS2B01G420400.1	Wheat	nucleus	26.16	23.94
TraesCS6B01G301500.1	Wheat	nucleus	20.64	23.2
TraesCS6B01G317100.1	Wheat	nucleus	18.6	22.15
TraesCS6B01G270100.1	Wheat	nucleus	24.13	21.34
TraesCS7B01G120600.1	Wheat	nucleus	18.9	20.38
TraesCS1B01G284300.1	Wheat	nucleus	18.31	19.94
TraesCS3B01G409600.1	Wheat	nucleus	18.6	19.34
TraesCS5B01G154100.1	Wheat	nucleus	18.31	18.64
TraesCS5B01G406500.1	Wheat	nucleus	20.35	18.32
TraesCS1B01G185700.1	Wheat	cytosol	6.98	11.06

Protein Annotations

EnsemblPlants:TraesCS5B01G087600.3	EnsemblPlantsGene:TraesCS5B01G087600	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	InterPro:Znf_Dof	PANTHER:PTHR31992	PANTHER:PTHR31992:SF75	PFAM:PD007478	PFAM:PF02701
PFscan:PS50884	ScanProsite:PS01361	SEG:seg	MapMan:15.5.1.5	:	:

Description

No Description!

Coordinates

chr5B:-:112194001..112195291

Molecular Weight (calculated)

35446.5 Da

IEP (calculated)

8.695

GRAVY (calculated)

-0.353

Length

344 amino acids

Sequence
(BLAST)

001: MVFSSFPIFL DPPSWAQMQQ QPLQCFMGGG GGSEHQHHQL IPASSGQLAP LPDVPGNTAA SAPPVAGSSS ASLQLVVSGQ QGNPGEQPPR PSVSMTERAR
101: MARVPLPEPG TLRCPRCDSA NTKFCYFNNY SLSQPRHFCK ACRRYWTRGG ALRNVPVGGG CRRNTKRSSK KSSRQGQGQG GGGAVAAATS SSSTTSTSTT
201: TSAAAATAAD VIASMQALPH HLGGLPAAAA LEASLEGYHS HSHHQHHNLP FLPPQFLQQG LHGYHIADGD IGSQLADGFP RGVASGLLAQ LASIKMEEHG
301: AGAGGAGGGF VGAHEQYWPG SGGGGGWPTE FLSGFSSSSS GNVM

Best Arabidopsis Sequence Match ( AT5G02460.1 )
(BLAST)

001: MVFSSFPTYP DHSSNWQQQH QPITTTVGFT GNNINQQFLP HHPLPPQQQQ TPPQLHHNNG NGGVAVPGGP GGLIRPGSMA ERARLANIPL PETALKCPRC
101: DSTNTKFCYF NNYSLTQPRH FCKACRRYWT RGGALRSVPV GGGCRRNKRT KNSSGGGGGS TSSGNSKSQD SATSNDQYHH RAMANNQMGP PSSSSSLSSL
201: LSSYNAGLIP GHDHNSNNNN ILGLGSSLPP LKLMPPLDFT DNFTLQYGAV SAPSYHIGGG SSGGAAALLN GFDQWRFPAT NQLPLGGLDP FDQQHQMEQQ
301: NPGYGLVTGS GQYRPKNIFH NLISSSSSAS SAMVTATASQ LASVKMEDSN NQLNLSRQLF GDEQQLWNIH GAAAASTAAA TSSWSEVSNN FSSSSTSNI

Arabidopsis Description

DOF5.1Dof zinc finger protein DOF5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZ56]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.