Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G097800.1 | Wheat | nucleus | 97.62 | 96.34 |
| TraesCS4D01G207600.1 | Wheat | nucleus | 97.09 | 96.33 |
| Bra009587.1-P | Field mustard | nucleus | 21.69 | 46.33 |
| KRH46814 | Soybean | nucleus | 35.45 | 36.51 |
| KRG99864 | Soybean | nucleus | 34.92 | 36.36 |
| TraesCS5B01G087600.3 | Wheat | nucleus | 30.95 | 34.01 |
| KRH70477 | Soybean | nucleus | 33.33 | 33.96 |
| Solyc09g010680.2.1 | Tomato | nucleus | 35.45 | 33.67 |
| CDY40358 | Canola | nucleus | 29.37 | 33.33 |
| PGSC0003DMT400023033 | Potato | nucleus | 35.45 | 33.25 |
| CDY70704 | Canola | nucleus | 31.48 | 32.6 |
| CDY55422 | Canola | nucleus | 33.33 | 31.42 |
| TraesCS1B01G045000.3 | Wheat | nucleus | 30.42 | 31.34 |
| CDY55549 | Canola | nucleus | 33.07 | 31.09 |
| CDX80822 | Canola | nucleus | 33.33 | 31.03 |
| Bra005725.1-P | Field mustard | nucleus | 33.07 | 31.02 |
| AT5G02460.1 | Thale cress | nucleus | 32.54 | 30.83 |
| CDY04855 | Canola | nucleus | 33.07 | 30.79 |
| Bra028872.1-P | Field mustard | nucleus | 33.07 | 30.79 |
| TraesCS5B01G492600.1 | Wheat | nucleus | 36.24 | 30.31 |
| TraesCS3B01G608800.1 | Wheat | nucleus | 27.51 | 27.66 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 25.13 | 26.76 |
| TraesCS3B01G608900.1 | Wheat | nucleus | 25.13 | 26.76 |
| TraesCS2B01G094000.1 | Wheat | nucleus | 22.75 | 26.06 |
| TraesCS3B01G609000.1 | Wheat | nucleus | 23.28 | 25.0 |
| TraesCS3B01G609100.1 | Wheat | nucleus | 22.75 | 24.78 |
| TraesCS6B01G301500.1 | Wheat | nucleus | 19.58 | 24.18 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 17.99 | 23.53 |
| TraesCS6B01G270100.1 | Wheat | nucleus | 23.28 | 22.62 |
| TraesCS2B01G420400.1 | Wheat | nucleus | 21.69 | 21.81 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 17.2 | 20.57 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 17.72 | 20.24 |
| TraesCS5B01G154100.1 | Wheat | nucleus | 17.46 | 19.53 |
| TraesCS7B01G120600.1 | Wheat | nucleus | 16.4 | 19.44 |
| TraesCS5B01G406500.1 | Wheat | nucleus | 17.2 | 17.02 |
| Bra009588.1-P | Field mustard | plastid | 7.94 | 16.85 |
| TraesCS1B01G185700.1 | Wheat | cytosol | 4.5 | 7.83 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G206800.1 | EnsemblPlantsGene:TraesCS4B01G206800 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF65 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr4B:+:440046072..440047441
Molecular Weight (calculated)
39352.1 Da
IEP (calculated)
9.720
GRAVY (calculated)
-0.557
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFPPATAYL DPPNWNNQQG QQQRATGGGG VGDAQHMPEG PTAGTPEVGG LPRSSAANEA AAGQQARPNS MTERARMARV PQPEPALKCP RCDSTNTKFC
101: YYNNYSLSQP RHFCKACRRY WTRGGALRSV PVGGGCRRNK RSSKSSAGAV SSSKPSSSSA RQLPGVASSM PSTAASTTLG ADGASIPPGL SSMSHHLPFM
201: GAMHPPGANL GLAFSAGLPQ LAMQQHHHHM DGVDQFPLAS GGGATFGASL EQWRVQQQQQ QFPFLELPPA PPMYQLGLQA SRAAGSSAAA PAPSPAMFTL
301: GQSSASIARR DEGSMKQADS KGQEMTLQRQ FMMEALRQGD GVWGGNASDN NGNGSGSWTM NIPGFHSSSG GGDGGGLL
101: YYNNYSLSQP RHFCKACRRY WTRGGALRSV PVGGGCRRNK RSSKSSAGAV SSSKPSSSSA RQLPGVASSM PSTAASTTLG ADGASIPPGL SSMSHHLPFM
201: GAMHPPGANL GLAFSAGLPQ LAMQQHHHHM DGVDQFPLAS GGGATFGASL EQWRVQQQQQ QFPFLELPPA PPMYQLGLQA SRAAGSSAAA PAPSPAMFTL
301: GQSSASIARR DEGSMKQADS KGQEMTLQRQ FMMEALRQGD GVWGGNASDN NGNGSGSWTM NIPGFHSSSG GGDGGGLL
001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.