Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G233700.1 | Wheat | cytosol, mitochondrion, nucleus | 98.16 | 98.16 |
| TraesCS2B01G420400.1 | Wheat | nucleus | 96.31 | 55.59 |
| TraesCS6B01G270100.1 | Wheat | nucleus | 54.84 | 30.59 |
| CDY08776 | Canola | nucleus | 4.61 | 11.63 |
| HORVU2Hr1G047750.4 | Barley | plastid | 9.68 | 9.29 |
| Zm00001d029512_P001 | Maize | nucleus | 14.29 | 8.83 |
| Os03t0276300-00 | Rice | cytosol | 5.53 | 8.63 |
| TraesCS5B01G154100.1 | Wheat | nucleus | 12.9 | 8.28 |
| Bra020261.1-P | Field mustard | nucleus | 7.83 | 7.14 |
| TraesCS5B01G087600.3 | Wheat | nucleus | 11.06 | 6.98 |
| KRH50082 | Soybean | nucleus | 9.22 | 6.94 |
| Bra002504.1-P | Field mustard | nucleus | 7.83 | 6.59 |
| TraesCS6B01G301500.1 | Wheat | nucleus | 9.22 | 6.54 |
| KRH20417 | Soybean | nucleus | 9.22 | 6.1 |
| TraesCS2B01G094000.1 | Wheat | nucleus | 9.22 | 6.06 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 9.22 | 6.04 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 8.76 | 6.01 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 9.22 | 5.63 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 7.37 | 5.54 |
| TraesCS5B01G492600.1 | Wheat | nucleus | 11.52 | 5.53 |
| Bra006675.1-P | Field mustard | nucleus | 6.91 | 5.42 |
| PGSC0003DMT400058729 | Potato | nucleus | 4.61 | 5.08 |
| AT5G60200.1 | Thale cress | nucleus | 5.99 | 5.06 |
| TraesCS1B01G045000.3 | Wheat | nucleus | 8.29 | 4.9 |
| AT3G45610.1 | Thale cress | nucleus | 5.53 | 4.9 |
| Solyc02g078620.1.1 | Tomato | nucleus | 5.99 | 4.58 |
| TraesCS4B01G206800.1 | Wheat | nucleus | 7.83 | 4.5 |
| TraesCS7B01G120600.1 | Wheat | nucleus | 5.99 | 4.08 |
| TraesCS3B01G609000.1 | Wheat | nucleus | 6.45 | 3.98 |
| TraesCS5B01G406500.1 | Wheat | nucleus | 6.91 | 3.93 |
| TraesCS3B01G609100.1 | Wheat | nucleus | 5.99 | 3.75 |
| VIT_00s0652g00010.t01 | Wine grape | nucleus | 5.07 | 3.73 |
| TraesCS3B01G608900.1 | Wheat | nucleus | 5.07 | 3.1 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 2.76 | 2.76 |
| TraesCS3B01G608800.1 | Wheat | nucleus | 4.61 | 2.66 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 4.15 | 2.54 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G185700.1 | EnsemblPlantsGene:TraesCS1B01G185700 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF28 | SEG:seg | MapMan:35.1 |
Description
No Description!
Coordinates
chr1B:-:332585938..332586591
Molecular Weight (calculated)
21690.3 Da
IEP (calculated)
4.869
GRAVY (calculated)
-0.415
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGAAPNKNQ KLAHEGAAHD LNLAFPHHQG GMQAQADYMA FPSLESSSMC NPGGGAMAGN GARAGGALSA MELLRSTGCY MPLQMPMQMP GEYGAAGFSL
101: GEFRAPAPPQ SQSLLGFSLD AHGPVGGAST AGYGSSAGMQ GMQDRSGRLP FAFEDLKPTA NSGAGGGESG GGSGAGVDGG DHQFEPGNKE QQGNGTPVGQ
201: PDTPGFWNGM IGGGGTW
101: GEFRAPAPPQ SQSLLGFSLD AHGPVGGAST AGYGSSAGMQ GMQDRSGRLP FAFEDLKPTA NSGAGGGESG GGSGAGVDGG DHQFEPGNKE QQGNGTPVGQ
201: PDTPGFWNGM IGGGGTW
001: MDATKWTQGF QEMINVKPME QMISSTNNNT PQQQPTFIAT NTRPNATASN GGSGGNTNNT ATMETRKARP QEKVNCPRCN STNTKFCYYN NYSLTQPRYF
101: CKGCRRYWTE GGSLRNVPVG GSSRKNKRSS TPLASPSNPK LPDLNPPILF SSQIPNKSNK DLNLLSFPVM QDHHHHGMSH FFHMPKIENN NTSSSIYASS
201: SPVSALELLR SNGVSSRGMN TFLPGQMMDS NSVLYSSLGF PTMPDYKQSN NNLSFSIDHH QGIGHNTINS NQRAQDNNDD MNGASRVLFP FSDMKELSST
301: TQEKSHGNNT YWNGMFSNTG GSSW
101: CKGCRRYWTE GGSLRNVPVG GSSRKNKRSS TPLASPSNPK LPDLNPPILF SSQIPNKSNK DLNLLSFPVM QDHHHHGMSH FFHMPKIENN NTSSSIYASS
201: SPVSALELLR SNGVSSRGMN TFLPGQMMDS NSVLYSSLGF PTMPDYKQSN NNLSFSIDHH QGIGHNTINS NQRAQDNNDD MNGASRVLFP FSDMKELSST
301: TQEKSHGNNT YWNGMFSNTG GSSW
Arabidopsis Description
DAG1Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:B3H6D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.