Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G377000.1 | Wheat | nucleus | 98.19 | 98.19 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 96.68 | 96.68 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 96.37 | 96.37 |
| Os01t0865800-00 | Rice | nucleus | 78.85 | 79.33 |
| EES03938 | Sorghum | nucleus | 77.04 | 76.12 |
| Zm00001d042736_P001 | Maize | nucleus | 73.11 | 74.46 |
| Zm00001d012280_P001 | Maize | nucleus | 66.77 | 65.38 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 52.57 | 55.06 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 21.75 | 28.8 |
| Bra017906.1-P | Field mustard | nucleus | 20.24 | 26.48 |
| CDY50231 | Canola | nucleus | 19.94 | 26.09 |
| CDY04620 | Canola | nucleus | 19.94 | 25.98 |
| CDY00373 | Canola | nucleus | 19.64 | 25.0 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 21.15 | 24.91 |
| Bra012277.1-P | Field mustard | nucleus | 19.34 | 24.52 |
| CDY61064 | Canola | nucleus | 19.34 | 24.52 |
| AT1G21340.1 | Thale cress | nucleus | 19.03 | 24.23 |
| PGSC0003DMT400002060 | Potato | nucleus | 19.03 | 23.68 |
| Solyc04g070960.1.1 | Tomato | nucleus | 19.03 | 23.6 |
| KRH53419 | Soybean | nucleus | 20.54 | 23.53 |
| KRH64521 | Soybean | nucleus | 20.54 | 23.53 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 19.64 | 22.49 |
| TraesCS6B01G301500.1 | Wheat | nucleus | 19.94 | 21.57 |
| TraesCS2B01G420400.1 | Wheat | nucleus | 23.57 | 20.74 |
| TraesCS6B01G270100.1 | Wheat | nucleus | 23.26 | 19.79 |
| TraesCS7B01G120600.1 | Wheat | nucleus | 18.73 | 19.44 |
| TraesCS2B01G094000.1 | Wheat | nucleus | 18.73 | 18.79 |
| TraesCS5B01G087600.3 | Wheat | nucleus | 19.34 | 18.6 |
| TraesCS1B01G045000.3 | Wheat | nucleus | 20.24 | 18.26 |
| TraesCS3B01G609100.1 | Wheat | nucleus | 19.03 | 18.16 |
| TraesCS5B01G154100.1 | Wheat | nucleus | 18.43 | 18.05 |
| TraesCS3B01G608900.1 | Wheat | nucleus | 19.03 | 17.75 |
| TraesCS4B01G206800.1 | Wheat | nucleus | 20.24 | 17.72 |
| TraesCS3B01G609000.1 | Wheat | nucleus | 18.43 | 17.33 |
| TraesCS5B01G406500.1 | Wheat | nucleus | 19.64 | 17.02 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 17.22 | 16.06 |
| TraesCS3B01G608800.1 | Wheat | nucleus | 18.13 | 15.96 |
| TraesCS5B01G492600.1 | Wheat | nucleus | 21.75 | 15.93 |
| TraesCS1B01G185700.1 | Wheat | cytosol | 6.04 | 9.22 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G409600.1 | EnsemblPlantsGene:TraesCS3B01G409600 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF39 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | MapMan:15.5.1.5 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:646002238..646003233
Molecular Weight (calculated)
35219.8 Da
IEP (calculated)
4.474
GRAVY (calculated)
-0.349
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSHPHEAA MLPYVPRPPS LLVDRRYSTG AEVAPNCPRC DSPNTKFCYY NNYSLSQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKNRRG KSSVRSTSDS
101: FSGVRDAAFG HGGFPGPLRP DMVLEGMVGN PANPGQAMHD VPTAPDGSSI DLAMLYSKFL NNQQPAGDGS LVGSVTPESA GGHVDETFDT FSASSDMSPG
201: GVLAPAQFDA SPDGFLEWSR PVSSADLNCT ASPATATTML CTDESVQAAL GELNFAMDQS CFDSLGLPTD GAAANLSSWC SIVPSLSTWE EPKYDSLDSF
301: PDDTLSLHDG ILAADHDWSA DCQGLEALYM P
101: FSGVRDAAFG HGGFPGPLRP DMVLEGMVGN PANPGQAMHD VPTAPDGSSI DLAMLYSKFL NNQQPAGDGS LVGSVTPESA GGHVDETFDT FSASSDMSPG
201: GVLAPAQFDA SPDGFLEWSR PVSSADLNCT ASPATATTML CTDESVQAAL GELNFAMDQS CFDSLGLPTD GAAANLSSWC SIVPSLSTWE EPKYDSLDSF
301: PDDTLSLHDG ILAADHDWSA DCQGLEALYM P
001: MERAEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKSRRP KSSSGNNTKT SLTANSGNPG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.