Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50231 | Canola | nucleus | 81.54 | 83.79 |
| Bra017906.1-P | Field mustard | nucleus | 80.77 | 83.0 |
| CDY04620 | Canola | nucleus | 79.62 | 81.5 |
| Bra012277.1-P | Field mustard | nucleus | 81.15 | 80.84 |
| CDY00373 | Canola | nucleus | 80.0 | 80.0 |
| CDY61064 | Canola | nucleus | 80.0 | 79.69 |
| KRH53419 | Soybean | nucleus | 33.85 | 30.45 |
| Solyc04g070960.1.1 | Tomato | nucleus | 30.77 | 29.96 |
| PGSC0003DMT400002060 | Potato | nucleus | 30.38 | 29.7 |
| KRH64521 | Soybean | nucleus | 32.69 | 29.41 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 30.77 | 28.47 |
| AT3G52440.2 | Thale cress | nucleus | 28.46 | 27.82 |
| AT2G28510.1 | Thale cress | nucleus | 25.38 | 22.92 |
| AT5G60200.1 | Thale cress | nucleus | 22.31 | 22.57 |
| AT3G45610.1 | Thale cress | nucleus | 21.15 | 22.45 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 21.15 | 22.0 |
| AT4G00940.2 | Thale cress | nucleus | 23.46 | 20.75 |
| AT1G64620.1 | Thale cress | nucleus | 27.69 | 20.45 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 24.62 | 20.25 |
| TraesCS1A01G275000.1 | Wheat | nucleus | 24.23 | 19.94 |
| AT4G24060.1 | Thale cress | nucleus | 26.15 | 19.88 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 24.23 | 19.27 |
| EES03938 | Sorghum | nucleus | 24.62 | 19.1 |
| Zm00001d042736_P001 | Maize | nucleus | 23.85 | 19.08 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 24.23 | 19.03 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 24.23 | 19.03 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 24.23 | 19.03 |
| TraesCS3A01G377000.1 | Wheat | nucleus | 24.23 | 19.03 |
| Os05t0440000-00 | Rice | nucleus | 23.85 | 18.96 |
| Os01t0865800-00 | Rice | nucleus | 23.85 | 18.84 |
| AT5G60850.1 | Thale cress | nucleus | 21.92 | 18.57 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 24.23 | 18.31 |
| AT3G61850.4 | Thale cress | nucleus | 22.69 | 18.21 |
| AT5G65590.1 | Thale cress | nucleus | 21.92 | 18.04 |
| AT2G46590.2 | Thale cress | nucleus | 25.38 | 17.89 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 25.38 | 17.51 |
| Zm00001d012280_P001 | Maize | nucleus | 22.69 | 17.46 |
| AT2G37590.1 | Thale cress | nucleus | 21.92 | 17.27 |
| EES18302 | Sorghum | plastid | 24.23 | 17.21 |
| AT5G62940.1 | Thale cress | nucleus | 23.46 | 16.4 |
| AT1G28310.2 | Thale cress | nucleus | 19.62 | 15.22 |
| AT3G55370.3 | Thale cress | nucleus | 21.54 | 15.22 |
| AT1G07640.3 | Thale cress | nucleus | 19.62 | 15.04 |
| AT2G28810.1 | Thale cress | nucleus | 18.85 | 14.41 |
| AT5G02460.1 | Thale cress | nucleus | 20.77 | 13.53 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:838733 | UniProt:A0A178W6V4 | EMBL:AC015447 | ProteinID:AEE30089.1 | ArrayExpress:AT1G21340 |
| EnsemblPlantsGene:AT1G21340 | RefSeq:AT1G21340 | TAIR:AT1G21340 | RefSeq:AT1G21340-TAIR-G | EnsemblPlants:AT1G21340.1 | TAIR:AT1G21340.1 |
| ProteinID:BAH30310.1 | UniProt:C0SUW9 | EMBL:DQ446268 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046872 | InterPro:IPR003851 | RefSeq:NP_173556.1 | ProteinID:OAP12802.1 | UniProt:P68349 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF15 |
| UniParc:UPI0000162E60 | InterPro:Znf_Dof | : | : | : | : |
Description
DOF1.2Dof zinc finger protein DOF1.2 [Source:UniProtKB/Swiss-Prot;Acc:P68349]
Coordinates
chr1:+:7476022..7476899
Molecular Weight (calculated)
29680.1 Da
IEP (calculated)
4.475
GRAVY (calculated)
-0.844
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPYIGHNSY QQHQFPLPEM EIPEKWKLSY EQEAITAPAC PRCASSNTKF CYYNNYSLSQ PRYFCKGCRR YWTKGGSLRN IPVGGGCRKR SRSRQNSHKR
101: FGRNENRPDG LINQDDGFQS SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG SDQDSPITTT THALESLSWD ICQETDVDLG FYGEFNNLTQ KTKEDQEVFG
201: QFLQEDREEI FEFQGLLDDK EIQEILECSF SEEPDQLVSQ GSFMINGDNW SSTDLTRFGI
101: FGRNENRPDG LINQDDGFQS SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG SDQDSPITTT THALESLSWD ICQETDVDLG FYGEFNNLTQ KTKEDQEVFG
201: QFLQEDREEI FEFQGLLDDK EIQEILECSF SEEPDQLVSQ GSFMINGDNW SSTDLTRFGI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.