Factsheet for AT1G64620.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70840	Canola	nucleus	27.27	84.96
CDY08392	Canola	nucleus	74.72	77.81
Bra027722.1-P	Field mustard	nucleus	71.31	77.47
VIT_02s0025g02250.t01	Wine grape	nucleus	44.32	54.17
AT4G24060.1	Thale cress	nucleus	47.16	48.54
AT3G61850.4	Thale cress	nucleus	33.24	36.11
AT2G46590.2	Thale cress	nucleus	36.93	35.23
AT4G00940.2	Thale cress	nucleus	28.41	34.01
AT5G60200.1	Thale cress	nucleus	20.45	28.02
AT1G21340.1	Thale cress	nucleus	20.45	27.69
AT3G45610.1	Thale cress	nucleus	18.18	26.12
AT3G52440.2	Thale cress	nucleus	19.32	25.56
AT5G60850.1	Thale cress	nucleus	22.16	25.41
AT5G62940.1	Thale cress	nucleus	24.72	23.39
AT2G28510.1	Thale cress	nucleus	19.03	23.26
AT3G55370.3	Thale cress	nucleus	23.58	22.55
AT5G65590.1	Thale cress	nucleus	19.32	21.52
AT2G37590.1	Thale cress	nucleus	20.17	21.52
AT2G28810.1	Thale cress	nucleus	20.17	20.88
AT1G07640.3	Thale cress	nucleus	19.6	20.35
AT1G28310.2	Thale cress	nucleus	18.75	19.7
AT5G02460.1	Thale cress	nucleus	21.02	18.55

Protein Annotations

MapMan:15.5.1.5	EntrezGene:842770	ProteinID:AAF19678.1	ProteinID:AEE34262.1	ArrayExpress:AT1G64620	EnsemblPlantsGene:AT1G64620
RefSeq:AT1G64620	TAIR:AT1G64620	RefSeq:AT1G64620-TAIR-G	EnsemblPlants:AT1G64620.1	TAIR:AT1G64620.1	EMBL:AY084898
EMBL:BT004047	EMBL:BT005148	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0044212	GO:GO:0046872	InterPro:IPR003851
RefSeq:NP_564836.1	PFAM:PD007478	PFAM:PF02701	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007095	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF78	UniProt:Q84JQ8
UniParc:UPI000000C250	InterPro:Znf_Dof	SEG:seg	:	:	:

Description

DOF1.8Dof zinc finger protein DOF1.8 [Source:UniProtKB/Swiss-Prot;Acc:Q84JQ8]

Coordinates

chr1:+:24006913..24009415

Molecular Weight (calculated)

37879.7 Da

IEP (calculated)

7.872

GRAVY (calculated)

-0.678

Length

352 amino acids

Sequence
(BLAST)

001: MDTAKWPQEF VVKPMNEIVT NTCLKQQSNP PSPATPVERK ARPEKDQALN CPRCNSLNTK FCYYNNYSLT QPRYFCKDCR RYWTAGGSLR NIPVGGGVRK
101: NKRSSSNSSS SSPSSSSSSK KPLFANNNTP TPPLPHLNPK IGEAAATKVQ DLTFSQGFGN AHEVKDLNLA FSQGFGIGHN HHSSIPEFLQ VVPSSSMKNN
201: PLVSTSSSLE LLGISSSSAS SNSRPAFMSY PNVHDSSVYT ASGFGLSYPQ FQEFMRPALG FSLDGGDPLR QEEGSSGTNN GRPLLPFESL LKLPVSSSST
301: NSGGNGNLKE NNDEHSDHEH EKEEGEADQS VGFWSGMLSA GASAAASGGS WQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.