Factsheet for AT3G55370.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, vacuole
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69145	Canola	nucleus, plastid	63.86	74.6
CDX73385	Canola	nucleus	61.14	74.5
Bra014752.1-P	Field mustard	nucleus	69.29	72.86
CDY40213	Canola	nucleus	67.12	69.58
CDX76102	Canola	nucleus	71.47	69.03
Bra007156.1-P	Field mustard	nucleus	60.05	67.58
VIT_13s0019g01410.t01	Wine grape	nucleus	40.49	44.21
GSMUA_Achr6P33410_001	Banana	nucleus	26.09	38.87
AT2G37590.1	Thale cress	nucleus	32.88	36.67
AT5G02460.1	Thale cress	nucleus	36.41	33.58
AT2G28810.1	Thale cress	nucleus	30.16	32.65
AT1G07640.3	Thale cress	nucleus	27.72	30.09
AT5G60200.1	Thale cress	nucleus	19.57	28.02
AT3G45610.1	Thale cress	nucleus	17.12	25.71
AT5G65590.1	Thale cress	nucleus	21.47	25.0
AT4G00940.2	Thale cress	nucleus	19.84	24.83
AT1G28310.2	Thale cress	nucleus	22.55	24.78
AT4G24060.1	Thale cress	nucleus	22.01	23.68
AT3G52440.2	Thale cress	nucleus	17.12	23.68
AT1G64620.1	Thale cress	nucleus	22.55	23.58
AT3G61850.4	Thale cress	nucleus	20.65	23.46
AT5G60850.1	Thale cress	nucleus	19.02	22.8
AT2G46590.2	Thale cress	nucleus	22.83	22.76
AT1G21340.1	Thale cress	nucleus	15.22	21.54
AT2G28510.1	Thale cress	nucleus	16.85	21.53
AT5G62940.1	Thale cress	nucleus	19.29	19.09

Protein Annotations

MapMan:15.5.1.5	EntrezGene:824703	EMBL:AB493653	ProteinID:AEE79373.1	ProteinID:AEE79375.1	EMBL:AF155818
EMBL:AK221402	ArrayExpress:AT3G55370	EnsemblPlantsGene:AT3G55370	RefSeq:AT3G55370	TAIR:AT3G55370	RefSeq:AT3G55370-TAIR-G
EnsemblPlants:AT3G55370.3	TAIR:AT3G55370.3	Unigene:At.19958	EMBL:BT033028	ProteinID:CAB75895.1	UniProt:F4IWU4
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009640
GO:GO:0009791	GO:GO:0009987	GO:GO:0043565	GO:GO:0044212	GO:GO:0045893	GO:GO:0046872
InterPro:IPR003851	RefSeq:NP_001190095.1	RefSeq:NP_191097.3	Symbol:OBP3	PFAM:PD007478	PFAM:PF02701
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001078	PO:PO:0004507	PO:PO:0007611
PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009046	PO:PO:0025022	PO:PO:0025281
ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF66	UniParc:UPI0001E92E70	InterPro:Znf_Dof
SEG:seg	:	:	:	:	:

Description

OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]

Coordinates

chr3:+:20527063..20529291

Molecular Weight (calculated)

40728.7 Da

IEP (calculated)

9.802

GRAVY (calculated)

-0.484

Length

368 amino acids

Sequence
(BLAST)

001: MVFSSLPVNQ FDSQNWQQMI SILVFFSTSR LFKKLFLVDK NLFSCLLQGL MYNVFLTGLI FSLQGNQHQL ECVTTDQNPN NYLRQLSSPP TSQVAGSSQA
101: RVNSMVERAR IAKVPLPEAA LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGS LRNVPVGGGF RRNKRSKSRS KSTVVVSTDN TTSTSSLTSR
201: PSYSNPSKFH SYGQIPEFNS NLPILPPLQS LGDYNSSNTG LDFGGTQISN MISGMSSSGG ILDAWRIPPS QQAQQFPFLI NTTGLVQSSN ALYPLLEGGV
301: SATQTRNVKA EENDQDRGRD GDGVNNLSRN FLGNININSG RNEEYTSWGG NSSWTGFTSN NSTGHLSF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.