Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53379 | Canola | nucleus | 60.76 | 79.91 |
| CDX77184 | Canola | nucleus | 70.83 | 79.69 |
| Bra035696.1-P | Field mustard | nucleus | 69.79 | 78.52 |
| Solyc06g005130.2.1 | Tomato | nucleus | 41.32 | 38.64 |
| PGSC0003DMT400075051 | Potato | nucleus | 37.85 | 37.46 |
| AT5G60200.1 | Thale cress | nucleus | 23.61 | 26.46 |
| AT3G45610.1 | Thale cress | nucleus | 21.88 | 25.71 |
| AT1G21340.1 | Thale cress | nucleus | 22.92 | 25.38 |
| AT3G52440.2 | Thale cress | nucleus | 22.92 | 24.81 |
| Solyc06g075370.2.1 | Tomato | nucleus | 25.69 | 24.42 |
| KRH24943 | Soybean | nucleus | 25.69 | 24.26 |
| PGSC0003DMT400019416 | Potato | nucleus | 25.35 | 24.17 |
| VIT_06s0004g03420.t01 | Wine grape | nucleus | 24.65 | 23.99 |
| GSMUA_Achr10P... | Banana | nucleus | 23.61 | 23.86 |
| KRG89059 | Soybean | nucleus | 25.35 | 23.55 |
| GSMUA_Achr11P... | Banana | nucleus | 21.18 | 23.02 |
| GSMUA_Achr11P... | Banana | nucleus | 23.61 | 22.97 |
| GSMUA_Achr10P... | Banana | nucleus | 21.53 | 22.79 |
| Solyc11g072500.1.1 | Tomato | nucleus | 22.22 | 22.46 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 21.18 | 22.43 |
| PGSC0003DMT400065271 | Potato | nucleus | 23.26 | 22.41 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 22.22 | 21.99 |
| AT4G00940.2 | Thale cress | nucleus | 22.22 | 21.77 |
| KRH22943 | Soybean | nucleus | 21.18 | 21.4 |
| KRH10402 | Soybean | nucleus | 21.18 | 21.4 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 20.14 | 21.17 |
| AT5G65590.1 | Thale cress | nucleus | 21.53 | 19.62 |
| AT3G61850.4 | Thale cress | nucleus | 21.88 | 19.44 |
| AT2G37590.1 | Thale cress | nucleus | 22.22 | 19.39 |
| AT1G64620.1 | Thale cress | nucleus | 23.26 | 19.03 |
| AT5G60850.1 | Thale cress | nucleus | 20.14 | 18.89 |
| AT2G46590.2 | Thale cress | nucleus | 23.96 | 18.7 |
| AT4G24060.1 | Thale cress | nucleus | 21.18 | 17.84 |
| AT5G62940.1 | Thale cress | nucleus | 22.92 | 17.74 |
| AT3G55370.3 | Thale cress | nucleus | 21.53 | 16.85 |
| AT1G28310.2 | Thale cress | nucleus | 19.44 | 16.72 |
| AT2G28810.1 | Thale cress | nucleus | 19.44 | 16.47 |
| AT1G07640.3 | Thale cress | nucleus | 18.75 | 15.93 |
| AT5G02460.1 | Thale cress | nucleus | 20.14 | 14.54 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:817399 | ProteinID:AAD21486.2 | ProteinID:AEC08133.1 | ArrayExpress:AT2G28510 | EnsemblPlantsGene:AT2G28510 |
| RefSeq:AT2G28510 | TAIR:AT2G28510 | RefSeq:AT2G28510-TAIR-G | EnsemblPlants:AT2G28510.1 | TAIR:AT2G28510.1 | EMBL:AY070421 |
| EMBL:AY085635 | Unigene:At.28359 | EMBL:BT001954 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046872 | InterPro:IPR003851 | RefSeq:NP_565673.1 | PFAM:PD007478 |
| PFAM:PF02701 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF69 | UniProt:Q8LE43 |
| UniParc:UPI000000BD63 | InterPro:Znf_Dof | SEG:seg | : | : | : |
Description
DOF2.1Dof zinc finger protein DOF2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LE43]
Coordinates
chr2:-:12199075..12200780
Molecular Weight (calculated)
31783.8 Da
IEP (calculated)
8.038
GRAVY (calculated)
-0.849
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPEQEISNE TLETILVSST KGSNNNNKKM EEEMKKKVSR GELGGEAQNC PRCESPNTKF CYYNNYSLSQ PRYFCKSCRR YWTKGGTLRN VPVGGGCRRN
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.