Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04855 | Canola | nucleus | 87.72 | 86.21 |
| Bra028872.1-P | Field mustard | nucleus | 87.72 | 86.21 |
| CDY55422 | Canola | nucleus | 86.22 | 85.79 |
| CDX80822 | Canola | nucleus | 87.22 | 85.71 |
| Bra005725.1-P | Field mustard | nucleus | 86.47 | 85.61 |
| CDY55549 | Canola | nucleus | 86.22 | 85.57 |
| CDY70704 | Canola | nucleus | 75.69 | 82.74 |
| CDY40358 | Canola | nucleus | 68.42 | 81.98 |
| Bra009587.1-P | Field mustard | nucleus | 35.84 | 80.79 |
| Bra009588.1-P | Field mustard | plastid | 32.83 | 73.6 |
| KRH46814 | Soybean | nucleus | 39.6 | 43.05 |
| KRG99864 | Soybean | nucleus | 39.1 | 42.98 |
| AT2G37590.1 | Thale cress | nucleus | 34.34 | 41.52 |
| Solyc09g010680.2.1 | Tomato | nucleus | 39.1 | 39.2 |
| PGSC0003DMT400023033 | Potato | nucleus | 39.1 | 38.71 |
| KRH70477 | Soybean | nucleus | 34.34 | 36.93 |
| AT3G55370.3 | Thale cress | nucleus | 33.58 | 36.41 |
| Os05t0112200-01 | Rice | nucleus | 25.81 | 35.52 |
| AT2G28810.1 | Thale cress | nucleus | 29.57 | 34.71 |
| AT1G07640.3 | Thale cress | nucleus | 28.82 | 33.92 |
| Os07t0236700-01 | Rice | nucleus | 29.82 | 33.71 |
| TraesCS4B01G206800.1 | Wheat | nucleus | 30.83 | 32.54 |
| TraesCS4D01G207600.1 | Wheat | nucleus | 30.83 | 32.28 |
| TraesCS4A01G097800.1 | Wheat | nucleus | 30.83 | 32.11 |
| Zm00001d035651_P001 | Maize | nucleus | 27.82 | 30.41 |
| HORVU1Hr1G005390.2 | Barley | nucleus | 27.32 | 29.86 |
| KXG21095 | Sorghum | nucleus | 28.57 | 29.61 |
| Zm00001d011058_P001 | Maize | nucleus | 25.06 | 29.59 |
| HORVU3Hr1G116260.1 | Barley | nucleus | 22.31 | 28.25 |
| HORVU3Hr1G116220.1 | Barley | nucleus, plastid | 27.07 | 27.2 |
| AT5G60200.1 | Thale cress | nucleus | 17.04 | 26.46 |
| HORVU3Hr1G116270.2 | Barley | nucleus | 22.81 | 26.15 |
| AT5G60850.1 | Thale cress | nucleus | 18.8 | 24.43 |
| AT3G45610.1 | Thale cress | nucleus | 14.54 | 23.67 |
| AT5G65590.1 | Thale cress | nucleus | 18.3 | 23.1 |
| AT3G52440.2 | Thale cress | nucleus | 15.29 | 22.93 |
| AT3G61850.4 | Thale cress | nucleus | 17.54 | 21.6 |
| AT1G28310.2 | Thale cress | nucleus | 18.05 | 21.49 |
| AT4G00940.2 | Thale cress | nucleus | 15.79 | 21.43 |
| AT4G24060.1 | Thale cress | nucleus | 18.3 | 21.34 |
| AT1G64620.1 | Thale cress | nucleus | 18.55 | 21.02 |
| AT1G21340.1 | Thale cress | nucleus | 13.53 | 20.77 |
| AT2G46590.2 | Thale cress | nucleus | 19.05 | 20.6 |
| AT2G28510.1 | Thale cress | nucleus | 14.54 | 20.14 |
| AT5G62940.1 | Thale cress | nucleus | 16.54 | 17.74 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:830976 | EMBL:AB493731 | ProteinID:AED90474.1 | EMBL:AL162874 | ArrayExpress:AT5G02460 |
| EnsemblPlantsGene:AT5G02460 | RefSeq:AT5G02460 | TAIR:AT5G02460 | RefSeq:AT5G02460-TAIR-G | EnsemblPlants:AT5G02460.1 | TAIR:AT5G02460.1 |
| EMBL:BX829408 | UniProt:C0SVM8 | ProteinID:CAB85983.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046872 | InterPro:IPR003851 | RefSeq:NP_195866.1 | PFAM:PD007478 | PFAM:PF02701 |
| PO:PO:0000293 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniProt:Q9LZ56 |
| UniParc:UPI00000AA983 | InterPro:Znf_Dof | SEG:seg | : | : | : |
Description
DOF5.1Dof zinc finger protein DOF5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZ56]
Coordinates
chr5:-:539249..541316
Molecular Weight (calculated)
42533.1 Da
IEP (calculated)
9.177
GRAVY (calculated)
-0.616
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSFPTYP DHSSNWQQQH QPITTTVGFT GNNINQQFLP HHPLPPQQQQ TPPQLHHNNG NGGVAVPGGP GGLIRPGSMA ERARLANIPL PETALKCPRC
101: DSTNTKFCYF NNYSLTQPRH FCKACRRYWT RGGALRSVPV GGGCRRNKRT KNSSGGGGGS TSSGNSKSQD SATSNDQYHH RAMANNQMGP PSSSSSLSSL
201: LSSYNAGLIP GHDHNSNNNN ILGLGSSLPP LKLMPPLDFT DNFTLQYGAV SAPSYHIGGG SSGGAAALLN GFDQWRFPAT NQLPLGGLDP FDQQHQMEQQ
301: NPGYGLVTGS GQYRPKNIFH NLISSSSSAS SAMVTATASQ LASVKMEDSN NQLNLSRQLF GDEQQLWNIH GAAAASTAAA TSSWSEVSNN FSSSSTSNI
101: DSTNTKFCYF NNYSLTQPRH FCKACRRYWT RGGALRSVPV GGGCRRNKRT KNSSGGGGGS TSSGNSKSQD SATSNDQYHH RAMANNQMGP PSSSSSLSSL
201: LSSYNAGLIP GHDHNSNNNN ILGLGSSLPP LKLMPPLDFT DNFTLQYGAV SAPSYHIGGG SSGGAAALLN GFDQWRFPAT NQLPLGGLDP FDQQHQMEQQ
301: NPGYGLVTGS GQYRPKNIFH NLISSSSSAS SAMVTATASQ LASVKMEDSN NQLNLSRQLF GDEQQLWNIH GAAAASTAAA TSSWSEVSNN FSSSSTSNI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.