Factsheet for HORVU3Hr1G116220.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G537400.1	Wheat	nucleus	90.68	95.74
TraesCS3A01G532000.1	Wheat	nucleus	89.17	95.16
TraesCS3B01G608800.1	Wheat	nucleus	89.42	94.41
TraesCS3A01G539000.1	Wheat	nucleus	52.39	77.32
Os05t0112200-01	Rice	nucleus	38.54	52.76
Zm00001d035651_P001	Maize	nucleus	45.34	49.32
HORVU1Hr1G005390.2	Barley	nucleus	45.09	49.04
Zm00001d011058_P001	Maize	nucleus	40.55	47.63
KXG21095	Sorghum	nucleus	45.59	47.01
Bra009587.1-P	Field mustard	nucleus	20.4	45.76
HORVU3Hr1G116260.1	Barley	nucleus	26.7	33.65
HORVU3Hr1G116270.2	Barley	nucleus	29.47	33.62
HORVU5Hr1G113190.2	Barley	nucleus, plastid	22.42	31.12
CDY40358	Canola	nucleus	25.69	30.63
HORVU5Hr1G021290.1	Barley	nucleus	25.69	29.57
CDY70704	Canola	nucleus	25.94	28.22
CDY55549	Canola	nucleus	27.96	27.61
CDY04855	Canola	nucleus	28.21	27.59
Bra028872.1-P	Field mustard	nucleus	28.21	27.59
Bra005725.1-P	Field mustard	nucleus	27.96	27.54
CDX80822	Canola	nucleus	27.96	27.34
KRH46814	Soybean	nucleus	25.19	27.25
AT5G02460.1	Thale cress	nucleus	27.2	27.07
KRH70477	Soybean	nucleus	24.94	26.68
KRG99864	Soybean	nucleus	24.18	26.45
CDY55422	Canola	nucleus	26.7	26.43
HORVU5Hr1G113220.6	Barley	nucleus	29.72	26.22
Solyc09g010680.2.1	Tomato	nucleus	25.19	25.13
PGSC0003DMT400023033	Potato	nucleus	25.44	25.06
HORVU5Hr1G097600.1	Barley	nucleus, plastid	13.35	22.84
HORVU2Hr1G013060.1	Barley	nucleus, plastid	15.37	20.47
HORVU7Hr1G043250.2	Barley	nucleus	14.61	20.42
HORVU1Hr1G074140.1	Barley	nucleus, vacuole	16.12	18.6
HORVU3Hr1G083460.1	Barley	nucleus	14.86	17.82
HORVU5Hr1G097620.1	Barley	nucleus	16.12	16.58
HORVU5Hr1G048700.1	Barley	nucleus	13.6	16.22
HORVU6Hr1G065250.3	Barley	nucleus	16.62	14.04
Bra009588.1-P	Field mustard	plastid	5.79	12.92
HORVU2Hr1G047750.4	Barley	plastid	4.03	7.08
HORVU2Hr1G095390.1	Barley	cytosol, mitochondrion, nucleus	3.02	5.43

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A287MTI9	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU3Hr1G116220	EnsemblPlants:HORVU3Hr1G116220.1
InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992
PANTHER:PTHR31992:SF59	UniParc:UPI000B468AEF	InterPro:Znf_Dof	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:+:695472251..695474132

Molecular Weight (calculated)

41142.3 Da

IEP (calculated)

8.572

GRAVY (calculated)

-0.698

Length

397 amino acids

Sequence
(BLAST)

001: SLSLSLSLSL PTTLCKSRSP AMIFPPAFLD SSSCWNTNHN QLQLQQIGSN THITATPSPA GHGDGGGSNN NNHGQQEGLM ATAGAGGGGG DGGGGGGGDG
101: DSAGGGNNKP MSMSERARLA RVPQPEPGLN CPRCDSTNTK FCYFNNYSLT QPRHFCRACR RYWTRGGALR NVPVGGGYRR HAKRSAKPKA GSAGSGTTTA
201: GTSSATSTTP STTACTTGTA TAPPALQYSM FGSAPPHGSR FADTFDPASL GLSFPARLLF PDSGAYGADG GPQQQHHHQG NGNGMEQWAA AQMQSFPFLH
301: AMDHQMSGNQ PPASAMPTTM AAMQGMFHLG LQSGGGGNGD DGGNHQFHHL PAKRDYQQQQ QQQQHEYPSS RGMYGDVVNG NGGGFNFYSS TSNAAGN

Best Arabidopsis Sequence Match ( AT3G55370.1 )
(BLAST)

001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF

Arabidopsis Description

OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.