Factsheet for HORVU5Hr1G021290.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G087600.3	Wheat	nucleus	97.97	98.26
TraesCS5D01G093800.2	Wheat	nucleus	97.97	97.97
TraesCS5A01G078100.1	Wheat	nucleus	97.1	97.95
Os12t0569900-01	Rice	nucleus	77.97	77.3
OQU79380	Sorghum	nucleus, vacuole	73.04	74.12
Zm00001d041549_P001	Maize	nucleus	72.75	73.18
GSMUA_Achr10P...	Banana	nucleus	35.07	35.91
PGSC0003DMT400078164	Potato	nucleus	32.75	35.31
KRG99864	Soybean	nucleus	35.65	33.88
KRH46814	Soybean	nucleus	35.94	33.79
Solyc06g076030.2.1	Tomato	nucleus	32.17	33.23
HORVU5Hr1G113190.2	Barley	nucleus, plastid	24.06	29.02
KRH70477	Soybean	nucleus	30.72	28.57
HORVU1Hr1G005390.2	Barley	nucleus	29.86	28.22
HORVU2Hr1G013060.1	Barley	nucleus, plastid	24.35	28.19
HORVU5Hr1G113220.6	Barley	nucleus	36.52	28.0
HORVU3Hr1G116220.1	Barley	nucleus, plastid	29.57	25.69
HORVU3Hr1G116270.2	Barley	nucleus	24.93	24.71
HORVU3Hr1G116260.1	Barley	nucleus	22.03	24.13
HORVU7Hr1G043250.2	Barley	nucleus	18.26	22.18
HORVU5Hr1G097600.1	Barley	nucleus, plastid	14.49	21.55
HORVU3Hr1G083460.1	Barley	nucleus	18.84	19.64
HORVU1Hr1G074140.1	Barley	nucleus, vacuole	18.84	18.9
HORVU5Hr1G048700.1	Barley	nucleus	17.68	18.32
HORVU6Hr1G065250.3	Barley	nucleus	24.35	17.87
HORVU5Hr1G097620.1	Barley	nucleus	19.42	17.36
HORVU2Hr1G047750.4	Barley	plastid	8.41	12.83
HORVU2Hr1G095390.1	Barley	cytosol, mitochondrion, nucleus	7.83	12.22

Protein Annotations

MapMan:15.5.1.5	EMBL:AK371779	UniProt:F2E6K5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU5Hr1G021290
EnsemblPlants:HORVU5Hr1G021290.1	InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF75	UniParc:UPI0002007E37	InterPro:Znf_Dof	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E6K5]

Coordinates

chrchr5H:-:102595849..102598026

Molecular Weight (calculated)

35665.7 Da

IEP (calculated)

8.695

GRAVY (calculated)

-0.382

Length

345 amino acids

Sequence
(BLAST)

001: MVFSSFPIFL DPPSWNQMQQ QQPLQCFMGG GGGSEHQHHQ LIPPSSGQLA PLPDVPGNTA ASAPAVAGSA SASLQLVVSG QQGNPGEQPP RPSVSMTERA
101: RMARVPLPEP GTLRCPRCDS ANTKFCYFNN YSLSQPRHFC KACRRYWTRG GALRNVPVGG GCRRNTKRSS KKSSRQGQGQ GGGGAVTAAT SSSSTTSTST
201: TTSAAAATAA DVIASMQALP HHLGGLPAAA ALEASLEGYH SHSHHQHHNL PFLPPQFLQQ GLHGYHFADG DIGSQLADGF PRGVASGLLA QLASIKMEEH
301: GAGAGGAGGG FVGAHEQYWP GSGGGGGWPT EFLSGFSSSS SGNVM

Best Arabidopsis Sequence Match ( AT2G28810.1 )
(BLAST)

001: MVFSSVSSFL DPPINWPQSA NPNNHPHHHQ LQENGSLVSG HHQVLSHHFP QNPNPNHHHV ETAAATTVDP SSLNGQAAER ARLAKNSQPP EGALKCPRCD
101: SANTKFCYFN NYNLTQPRHF CKACRRYWTR GGALRNVPVG GGCRRNKKGK SGNSKSSSSS QNKQSTSMVN ATSPTNTSNV QLQTNSQFPF LPTLQNLTQL
201: GGIGLNLAAI NGNNGGNGNT SSSFLNDLGF FHGGNTSGPV MGNNNENNLM TSLGSSSHFA LFDRTMGLYN FPNEVNMGLS SIGATRVSQT AQVKMEDNHL
301: GNISRPVSGL TSPGNQSNQY WTGQGLPGSS SNDHHHQHLM

Arabidopsis Description

DOF2.2Dof zinc finger protein DOF2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.