Factsheet for HORVU2Hr1G013060.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G076600.1	Wheat	nucleus	93.96	85.37
TraesCS2A01G079200.1	Wheat	nucleus	92.62	84.66
TraesCS2B01G094000.1	Wheat	nucleus	93.62	84.55
EER91281	Sorghum	nucleus	64.43	49.87
Zm00001d033093_P001	Maize	nucleus	59.4	49.17
Zm00001d013783_P001	Maize	nucleus	45.64	46.74
GSMUA_Achr6P25190_001	Banana	nucleus	24.83	28.79
GSMUA_Achr7P27030_001	Banana	nucleus, plastid	28.52	26.07
HORVU5Hr1G021290.1	Barley	nucleus	28.19	24.35
HORVU7Hr1G043250.2	Barley	nucleus	21.14	22.18
GSMUA_Achr4P16590_001	Banana	nucleus	25.17	21.87
HORVU5Hr1G097600.1	Barley	nucleus, plastid	15.44	19.83
HORVU5Hr1G113190.2	Barley	nucleus, plastid	18.46	19.23
HORVU2Hr1G047750.4	Barley	plastid	14.43	19.03
HORVU5Hr1G048700.1	Barley	nucleus	20.13	18.02
HORVU1Hr1G005390.2	Barley	nucleus	21.48	17.53
HORVU3Hr1G083460.1	Barley	nucleus	19.46	17.52
HORVU1Hr1G074140.1	Barley	nucleus, vacuole	19.8	17.15
HORVU5Hr1G113220.6	Barley	nucleus	24.83	16.44
HORVU3Hr1G116270.2	Barley	nucleus	18.12	15.52
HORVU3Hr1G116220.1	Barley	nucleus, plastid	20.47	15.37
HORVU3Hr1G116260.1	Barley	nucleus	16.11	15.24
HORVU6Hr1G065250.3	Barley	nucleus	22.82	14.47
HORVU5Hr1G097620.1	Barley	nucleus	18.46	14.25
HORVU2Hr1G095390.1	Barley	cytosol, mitochondrion, nucleus	6.38	8.6

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A287H3Z6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU2Hr1G013060	EnsemblPlants:HORVU2Hr1G013060.1
InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF82
UniParc:UPI000B4803F3	InterPro:Znf_Dof	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:28509602..28510792

Molecular Weight (calculated)

30196.9 Da

IEP (calculated)

8.884

GRAVY (calculated)

-0.373

Length

298 amino acids

Sequence
(BLAST)

001: PRCDSPNTKF CYYNNYSLSQ PRHFCKTCRR YWTKGGALRS VPVGGGCRKN KRSRSGSSAA SASRGLSLTT PAGGTADQDQ HAARMSVGGF PAGGGGGDFR
101: GVVGMLPVLH SPAVVGQYVP FGDWSSGETN GGGRGTNGSA GAGNGAASSA IASSIESLSF INQDLHWKLQ QQRVATMFLG PPSASSSSHH HVVGGGSNSN
201: GMSAAVQFGG GGTFLQMAGL SGCMETLPTA TTWFMDNSYA LPSPPRPAAG VGAASSNINS GRSSGGGGDD NATSNDDNNN CGGSIPSWGD ISTFAMLP

Best Arabidopsis Sequence Match ( AT5G65590.1 )
(BLAST)

001: MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP

Arabidopsis Description

DOF5.7SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.