Factsheet for HORVU1Hr1G074140.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus

Predictor Summary:

plastid 1
nucleus 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, vacuole
Any Predictor:	nucleus, plastid, vacuole
iPSORT:	plastid
MultiLoc:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G284300.1	Wheat	nucleus	79.07	86.08
TraesCS1A01G275000.1	Wheat	nucleus	77.33	84.18
TraesCS1D01G274700.1	Wheat	mitochondrion	84.3	76.92
Os05t0440000-00	Rice	nucleus	62.21	65.44
Zm00001d038281_P001	Maize	mitochondrion, nucleus	53.78	56.57
EES18302	Sorghum	plastid	58.14	54.64
HORVU3Hr1G083460.1	Barley	nucleus	50.0	51.96
GSMUA_Achr8P32880_001	Banana	nucleus	20.64	28.4
VIT_18s0001g15730.t01	Wine grape	nucleus	20.93	25.62
CDY50231	Canola	nucleus	18.6	25.3
CDY04620	Canola	nucleus	18.6	25.2
Bra017906.1-P	Field mustard	nucleus	18.31	24.9
CDY00373	Canola	nucleus	18.6	24.62
AT1G21340.1	Thale cress	nucleus	18.31	24.23
Bra012277.1-P	Field mustard	nucleus	18.31	24.14
CDY61064	Canola	nucleus	18.31	24.14
PGSC0003DMT400002060	Potato	nucleus	18.6	24.06
Solyc04g070960.1.1	Tomato	nucleus	18.6	23.97
KRH53419	Soybean	nucleus	19.19	22.84
KRH64521	Soybean	nucleus	19.19	22.84
HORVU5Hr1G113190.2	Barley	nucleus, plastid	17.44	20.98
HORVU5Hr1G097600.1	Barley	nucleus, plastid	13.95	20.69
HORVU7Hr1G043250.2	Barley	nucleus	16.86	20.42
HORVU2Hr1G013060.1	Barley	nucleus, plastid	17.15	19.8
HORVU1Hr1G005390.2	Barley	nucleus	20.06	18.9
HORVU5Hr1G021290.1	Barley	nucleus	18.9	18.84
HORVU5Hr1G048700.1	Barley	nucleus	17.44	18.02
HORVU3Hr1G116260.1	Barley	nucleus	15.41	16.83
HORVU6Hr1G065250.3	Barley	nucleus	22.38	16.38
HORVU3Hr1G116220.1	Barley	nucleus, plastid	18.6	16.12
HORVU5Hr1G097620.1	Barley	nucleus	17.73	15.8
HORVU5Hr1G113220.6	Barley	nucleus	20.35	15.56
HORVU3Hr1G116270.2	Barley	nucleus	15.7	15.52
HORVU2Hr1G095390.1	Barley	cytosol, mitochondrion, nucleus	6.4	9.95
HORVU2Hr1G047750.4	Barley	plastid	3.49	5.31

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A287G8J9	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G074140	EnsemblPlants:HORVU1Hr1G074140.1
InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992
PANTHER:PTHR31992:SF72	UniParc:UPI000B476DA0	InterPro:Znf_Dof	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:-:506773498..506774849

Molecular Weight (calculated)

36595.0 Da

IEP (calculated)

5.591

GRAVY (calculated)

-0.357

Length

344 amino acids

Sequence
(BLAST)

001: KLPNPLTSPH SYIPPALLLA DLLLDLRSIS IVAMLSSHCE SMLAYAAAAA GRRAMLVDPR RYRPNVEVAP NCPRCDSPNT KFCYYNNYSL SQPRYFCKGC
101: RRYWTKGGSL RNVPVGGGCR KNRRGKPVRP LADTASENHG AAAFSHQFHG PVRPDLLLEG MVGNPAELGQ PASADKPTEA AEGSTIDLAV LYSKFLSHQS
201: HAEQRAVGPE SADPSSGSST EMSPPALSSP GQHGFGEICG APSSTEPGET TMLECGDARA QALGELNFGV DQSCYDSLGL PADGGDLMLP SAWGQEAKYE
301: PFNSLPEEDA MSLHEGVAGG YDVWSKVMGC QGLEAALSAG FDRC

Best Arabidopsis Sequence Match ( AT3G52440.1 )
(BLAST)

001: MERAEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKSRRP KSSSGNNTKT SLTANSGNPG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG

Arabidopsis Description

Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.