Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G608900.1 | Wheat | nucleus | 73.56 | 72.11 |
| TraesCS3B01G609000.1 | Wheat | nucleus | 71.55 | 70.74 |
| TraesCS3A01G532200.1 | Wheat | nucleus | 71.84 | 70.42 |
| TraesCS3B01G609100.1 | Wheat | nucleus | 69.54 | 69.74 |
| TraesCS3D01G537500.1 | Wheat | nucleus | 72.41 | 65.97 |
| TraesCS3A01G532100.1 | Wheat | nucleus | 71.55 | 65.7 |
| HORVU3Hr1G116260.1 | Barley | nucleus | 54.89 | 60.63 |
| Bra009587.1-P | Field mustard | nucleus | 20.98 | 41.24 |
| Os05t0112200-01 | Rice | nucleus | 25.29 | 30.34 |
| HORVU3Hr1G116220.1 | Barley | nucleus, plastid | 33.62 | 29.47 |
| Zm00001d035651_P001 | Maize | nucleus | 29.31 | 27.95 |
| HORVU5Hr1G113190.2 | Barley | nucleus, plastid | 22.7 | 27.62 |
| HORVU1Hr1G005390.2 | Barley | nucleus | 28.74 | 27.4 |
| CDY40358 | Canola | nucleus | 25.29 | 26.43 |
| KXG21095 | Sorghum | nucleus | 29.02 | 26.23 |
| Zm00001d011058_P001 | Maize | nucleus | 24.43 | 25.15 |
| HORVU5Hr1G021290.1 | Barley | nucleus | 24.71 | 24.93 |
| CDY70704 | Canola | nucleus | 25.57 | 24.38 |
| KRH70477 | Soybean | nucleus | 25.29 | 23.72 |
| HORVU5Hr1G113220.6 | Barley | nucleus | 30.17 | 23.33 |
| KRH46814 | Soybean | nucleus | 24.43 | 23.16 |
| AT5G02460.1 | Thale cress | nucleus | 26.15 | 22.81 |
| KRG99864 | Soybean | nucleus | 23.56 | 22.59 |
| CDY55422 | Canola | nucleus | 25.86 | 22.44 |
| CDY55549 | Canola | nucleus | 25.57 | 22.14 |
| Bra005725.1-P | Field mustard | nucleus | 25.57 | 22.08 |
| CDX80822 | Canola | nucleus | 25.57 | 21.92 |
| CDY04855 | Canola | nucleus | 25.29 | 21.67 |
| Bra028872.1-P | Field mustard | nucleus | 25.0 | 21.43 |
| Solyc09g010680.2.1 | Tomato | nucleus | 24.43 | 21.36 |
| PGSC0003DMT400023033 | Potato | nucleus | 24.43 | 21.09 |
| HORVU5Hr1G097600.1 | Barley | nucleus, plastid | 12.93 | 19.4 |
| HORVU7Hr1G043250.2 | Barley | nucleus | 15.23 | 18.66 |
| HORVU2Hr1G013060.1 | Barley | nucleus, plastid | 15.52 | 18.12 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 15.8 | 16.62 |
| HORVU5Hr1G048700.1 | Barley | nucleus | 15.52 | 16.22 |
| HORVU5Hr1G097620.1 | Barley | nucleus | 17.82 | 16.06 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 15.52 | 15.7 |
| HORVU6Hr1G065250.3 | Barley | nucleus | 19.25 | 14.26 |
| Bra009588.1-P | Field mustard | plastid | 3.74 | 7.3 |
| HORVU2Hr1G047750.4 | Barley | plastid | 3.45 | 5.31 |
| HORVU2Hr1G095390.1 | Barley | cytosol, mitochondrion, nucleus | 3.16 | 4.98 |
Protein Annotations
| MapMan:15.5.1.5 | UniProt:A0A287MTJ5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU3Hr1G116270 | EnsemblPlants:HORVU3Hr1G116270.2 |
| InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 |
| PANTHER:PTHR31992:SF75 | UniParc:UPI000B46910F | InterPro:Znf_Dof | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:-:695512577..695514778
Molecular Weight (calculated)
37915.2 Da
IEP (calculated)
7.588
GRAVY (calculated)
-0.607
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFLPAFLDS SNFWNTDHNQ LIQQMQQIGT NTHSTTTPSQ DGPGAGGCSN NNQEGFMAMA GAGGSGDVGC GGAEDGDCGG SGNRKSTSSM SERARLARLP
101: QPVPGLNCPR CDSTNTKFCY FNNYSLTQPR HFCRSCRRYW TRGGALRNVP MGGAYRRHAK RRAKPKMVSD TSGDAIVGTS SVTSVISRGT TYATSTSTVP
201: IAFEYTMSGS VPWHNSQLTD NFDPASLVLG FPDRLLFADS RAYTMDDCAQ HQHHHAHGNG MEQWAAAQVD NFPFMHDMDH QMSGLPAEAM PITMATMQGM
301: FHLGLDSLGN GGHQFQHSST RRNHKKQDYP SNRVMYEDVV NGNGCGYI
101: QPVPGLNCPR CDSTNTKFCY FNNYSLTQPR HFCRSCRRYW TRGGALRNVP MGGAYRRHAK RRAKPKMVSD TSGDAIVGTS SVTSVISRGT TYATSTSTVP
201: IAFEYTMSGS VPWHNSQLTD NFDPASLVLG FPDRLLFADS RAYTMDDCAQ HQHHHAHGNG MEQWAAAQVD NFPFMHDMDH QMSGLPAEAM PITMATMQGM
301: FHLGLDSLGN GGHQFQHSST RRNHKKQDYP SNRVMYEDVV NGNGCGYI
001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.