Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400023033 | Potato | nucleus | 95.48 | 94.29 |
| Bra009587.1-P | Field mustard | nucleus | 22.86 | 51.41 |
| Solyc10g086440.1.1 | Tomato | nucleus | 46.23 | 50.83 |
| CDY40358 | Canola | nucleus | 34.67 | 41.44 |
| CDY70704 | Canola | nucleus | 37.69 | 41.1 |
| Bra005725.1-P | Field mustard | nucleus | 39.95 | 39.45 |
| CDY55549 | Canola | nucleus | 39.7 | 39.3 |
| CDY04855 | Canola | nucleus | 39.95 | 39.16 |
| CDX80822 | Canola | nucleus | 39.95 | 39.16 |
| CDY55422 | Canola | nucleus | 39.45 | 39.15 |
| AT5G02460.1 | Thale cress | nucleus | 39.2 | 39.1 |
| Bra028872.1-P | Field mustard | nucleus | 39.7 | 38.92 |
| Solyc06g076030.2.1 | Tomato | nucleus | 32.41 | 38.62 |
| Solyc05g054510.1.1 | Tomato | nucleus | 28.89 | 38.59 |
| TraesCS4B01G206800.1 | Wheat | nucleus | 33.67 | 35.45 |
| TraesCS4D01G207600.1 | Wheat | nucleus | 33.92 | 35.43 |
| TraesCS4A01G097800.1 | Wheat | nucleus | 33.92 | 35.25 |
| Os05t0112200-01 | Rice | nucleus | 25.38 | 34.83 |
| Os07t0236700-01 | Rice | nucleus | 30.15 | 33.99 |
| Zm00001d035651_P001 | Maize | nucleus | 28.64 | 31.23 |
| Solyc11g066050.1.1 | Tomato | nucleus | 24.62 | 30.72 |
| KXG21095 | Sorghum | nucleus | 29.15 | 30.13 |
| HORVU1Hr1G005390.2 | Barley | nucleus | 26.88 | 29.32 |
| Zm00001d011058_P001 | Maize | nucleus | 24.87 | 29.29 |
| Solyc03g082840.2.1 | Tomato | nucleus | 18.59 | 28.68 |
| Solyc06g075370.2.1 | Tomato | nucleus | 20.35 | 26.73 |
| HORVU3Hr1G116220.1 | Barley | nucleus, plastid | 25.13 | 25.19 |
| HORVU3Hr1G116260.1 | Barley | nucleus | 19.6 | 24.76 |
| Bra009588.1-P | Field mustard | plastid | 11.06 | 24.72 |
| Solyc02g090310.1.1 | Tomato | nucleus | 16.08 | 24.62 |
| Solyc10g009360.2.1 | Tomato | nucleus | 16.08 | 24.52 |
| HORVU3Hr1G116270.2 | Barley | nucleus | 21.36 | 24.43 |
| Solyc02g078620.1.1 | Tomato | nucleus | 16.58 | 23.24 |
| Solyc11g072500.1.1 | Tomato | nucleus | 16.58 | 23.16 |
| Solyc06g071480.2.1 | Tomato | nucleus | 16.08 | 22.94 |
| Solyc02g077960.1.1 | Tomato | nucleus | 17.09 | 22.74 |
| Solyc11g010940.1.1 | Tomato | nucleus | 21.36 | 22.67 |
| Solyc04g070960.1.1 | Tomato | nucleus | 15.08 | 22.47 |
| Solyc02g077950.1.1 | Tomato | nucleus | 21.11 | 22.16 |
| Solyc01g096120.2.1 | Tomato | nucleus | 15.33 | 22.1 |
| Solyc08g082910.1.1 | Tomato | nucleus | 17.09 | 21.38 |
| Solyc06g005130.2.1 | Tomato | nucleus | 16.33 | 21.1 |
| Solyc03g112930.2.1 | Tomato | nucleus | 16.83 | 20.12 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | UniProt:K4CR95 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | EnsemblPlantsGene:Solyc09g010680.2 |
| EnsemblPlants:Solyc09g010680.2.1 | UniParc:UPI000276AD24 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
No Description!
Coordinates
chr9:+:3999004..4000745
Molecular Weight (calculated)
42447.9 Da
IEP (calculated)
9.524
GRAVY (calculated)
-0.714
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFSSIPAYL DPANWQQQSG STIQNHHHHQ QQQLTSAPPP PVLPPGPPVV APLQPHGGGG AGSIRPGSMA DRARMANITM PETALKCPRC DSTNTKFCYF
101: NNYSLSQPRH FCKACKRYWT RGGALRSVPV GGGCRRNKRS NNNNKNSTNN NNNNNSSKSP ASSTSTDGRQ GTNNSGSSTT ISSHSNSFSG PTSAASLLGL
201: MSPQIPPLRF MSPLGQFSSD HHHHHHFTPS NHMNLNFSTS SCGNILGGTT EGMMVSNNNL LGTGTGAGVG GHVASLLSSG NLEHWRMQQQ FPNFLGGFDP
301: SNSPSSYPFQ GGVHEAVQYL GGESTSQISR PKISTSMLNQ MASVKMEDNN NNNSNQDQSA LSRQLLGIQG NNENWNTSAS AWSDLSASFS SSSTSNAL
101: NNYSLSQPRH FCKACKRYWT RGGALRSVPV GGGCRRNKRS NNNNKNSTNN NNNNNSSKSP ASSTSTDGRQ GTNNSGSSTT ISSHSNSFSG PTSAASLLGL
201: MSPQIPPLRF MSPLGQFSSD HHHHHHFTPS NHMNLNFSTS SCGNILGGTT EGMMVSNNNL LGTGTGAGVG GHVASLLSSG NLEHWRMQQQ FPNFLGGFDP
301: SNSPSSYPFQ GGVHEAVQYL GGESTSQISR PKISTSMLNQ MASVKMEDNN NNNSNQDQSA LSRQLLGIQG NNENWNTSAS AWSDLSASFS SSSTSNAL
001: MVFSSIQAYL DSSNWQQAPP SNYNHDGTGA SANGGHVLRP QLQPQQQPQQ QPHPNGSGGG GGGGGGSIRA GSMVDRARQA NVALPEAALK CPRCESTNTK
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
Arabidopsis Description
DOF2.4Dof zinc finger protein DOF2.4 [Source:UniProtKB/Swiss-Prot;Acc:O80928]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.