Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G116270.2 | Barley | nucleus | 60.63 | 54.89 |
| Bra009587.1-P | Field mustard | nucleus | 22.54 | 40.11 |
| Os05t0112200-01 | Rice | nucleus | 25.4 | 27.59 |
| Zm00001d035651_P001 | Maize | nucleus | 31.11 | 26.85 |
| HORVU3Hr1G116220.1 | Barley | nucleus, plastid | 33.65 | 26.7 |
| HORVU1Hr1G005390.2 | Barley | nucleus | 30.79 | 26.58 |
| CDY40358 | Canola | nucleus | 27.3 | 25.83 |
| HORVU5Hr1G113190.2 | Barley | nucleus, plastid | 22.86 | 25.17 |
| KXG21095 | Sorghum | nucleus | 30.48 | 24.94 |
| Zm00001d011058_P001 | Maize | nucleus | 25.08 | 23.37 |
| CDY70704 | Canola | nucleus | 26.98 | 23.29 |
| CDY55549 | Canola | nucleus | 28.89 | 22.64 |
| Bra005725.1-P | Field mustard | nucleus | 28.89 | 22.58 |
| CDY55422 | Canola | nucleus | 28.57 | 22.44 |
| AT5G02460.1 | Thale cress | nucleus | 28.25 | 22.31 |
| CDX80822 | Canola | nucleus | 28.57 | 22.17 |
| CDY04855 | Canola | nucleus | 28.57 | 22.17 |
| KRH70477 | Soybean | nucleus | 26.03 | 22.1 |
| HORVU5Hr1G021290.1 | Barley | nucleus | 24.13 | 22.03 |
| Bra028872.1-P | Field mustard | nucleus | 28.25 | 21.92 |
| KRH46814 | Soybean | nucleus | 25.4 | 21.8 |
| KRG99864 | Soybean | nucleus | 24.44 | 21.21 |
| HORVU5Hr1G113220.6 | Barley | nucleus | 30.16 | 21.11 |
| HORVU5Hr1G097600.1 | Barley | nucleus, plastid | 14.6 | 19.83 |
| Solyc09g010680.2.1 | Tomato | nucleus | 24.76 | 19.6 |
| PGSC0003DMT400023033 | Potato | nucleus | 24.76 | 19.35 |
| HORVU7Hr1G043250.2 | Barley | nucleus | 16.51 | 18.31 |
| HORVU5Hr1G048700.1 | Barley | nucleus | 17.46 | 16.52 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 17.14 | 16.31 |
| HORVU2Hr1G013060.1 | Barley | nucleus, plastid | 15.24 | 16.11 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 16.83 | 15.41 |
| HORVU5Hr1G097620.1 | Barley | nucleus | 18.73 | 15.29 |
| HORVU6Hr1G065250.3 | Barley | nucleus | 21.27 | 14.26 |
| Bra009588.1-P | Field mustard | plastid | 5.08 | 8.99 |
| HORVU2Hr1G047750.4 | Barley | plastid | 4.76 | 6.64 |
| HORVU2Hr1G095390.1 | Barley | cytosol, mitochondrion, nucleus | 3.17 | 4.52 |
Protein Annotations
| MapMan:15.5.1.5 | UniProt:A0A287MTK3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU3Hr1G116260 | EnsemblPlants:HORVU3Hr1G116260.1 |
| InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 |
| PANTHER:PTHR31992:SF75 | UniParc:UPI000B474983 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:-:695495319..695497770
Molecular Weight (calculated)
34440.2 Da
IEP (calculated)
7.109
GRAVY (calculated)
-0.554
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MIFLPAFLDS SNFWNTDHNQ LIQLQQIGTN TPSPSGAGDG GGNNSNQEIF MATTGVGAGG GGDDGCCGVG DGDGGGSRIS MPMSMLERSR LVRVPQPVSG
101: LNCPRCDSTN TKFCYFNNYS ITQPRHFCRA CRRYWTRGGA LRNIPIGGGS RRHAKRRAKP KAAGTTSSRT TTCATSSPQL QYSMFGSASS PDSWFTDSFD
201: LASLGFSYPA RVLFPDSDSY AIDGCEQQHQ HQSHGNGIEQ WVAAQMESFP LMHAMDHQMY EQPAEAMPIT MAAMQVHVSP RAIRHYNVGE GMATTEEDSS
301: TTHWPRETTI FQRFH
101: LNCPRCDSTN TKFCYFNNYS ITQPRHFCRA CRRYWTRGGA LRNIPIGGGS RRHAKRRAKP KAAGTTSSRT TTCATSSPQL QYSMFGSASS PDSWFTDSFD
201: LASLGFSYPA RVLFPDSDSY AIDGCEQQHQ HQSHGNGIEQ WVAAQMESFP LMHAMDHQMY EQPAEAMPIT MAAMQVHVSP RAIRHYNVGE GMATTEEDSS
301: TTHWPRETTI FQRFH
001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.