Factsheet for HORVU5Hr1G097600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08775	Canola	nucleus	22.41	26.53
HORVU7Hr1G043250.2	Barley	nucleus	27.59	22.54
Solyc02g090310.1.1	Tomato	nucleus	23.28	20.77
HORVU5Hr1G097620.1	Barley	nucleus	33.62	20.21
GSMUA_Achr10P...	Banana	nucleus	25.0	19.86
PGSC0003DMT400025984	Potato	nucleus	23.71	19.64
GSMUA_Achr9P09650_001	Banana	nucleus	24.57	18.87
GSMUA_Achr8P02840_001	Banana	nucleus	24.57	18.57
KRH76935	Soybean	nucleus	26.72	18.45
KRH28526	Soybean	nucleus	26.72	18.29
KRH04709	Soybean	nucleus	26.72	17.61
Bra037822.1-P	Field mustard	nucleus	21.12	17.25
VIT_00s0253g00060.t01	Wine grape	nucleus	25.86	17.05
CDX81292	Canola	nucleus	20.69	17.02
CDY70838	Canola	nucleus	22.41	16.99
CDY70312	Canola	nucleus	20.69	16.9
GSMUA_Achr9P26560_001	Banana	nucleus	22.41	16.4
Bra024399.1-P	Field mustard	nucleus	21.55	16.34
CDY33948	Canola	nucleus	21.12	16.23
Bra031853.1-P	Field mustard	nucleus	21.12	16.12
CDY37834	Canola	nucleus	21.12	16.12
HORVU5Hr1G113190.2	Barley	nucleus, plastid	19.83	16.08
AT5G65590.1	Thale cress	nucleus	21.55	15.82
HORVU2Hr1G013060.1	Barley	nucleus, plastid	19.83	15.44
HORVU3Hr1G083460.1	Barley	nucleus	21.55	15.11
HORVU3Hr1G116260.1	Barley	nucleus	19.83	14.6
HORVU5Hr1G021290.1	Barley	nucleus	21.55	14.49
HORVU1Hr1G074140.1	Barley	nucleus, vacuole	20.69	13.95
HORVU1Hr1G005390.2	Barley	nucleus	21.12	13.42
HORVU3Hr1G116220.1	Barley	nucleus, plastid	22.84	13.35
HORVU5Hr1G048700.1	Barley	nucleus	18.97	13.21
HORVU3Hr1G116270.2	Barley	nucleus	19.4	12.93
HORVU6Hr1G065250.3	Barley	nucleus	24.14	11.91
HORVU5Hr1G113220.6	Barley	nucleus	22.41	11.56
HORVU2Hr1G095390.1	Barley	cytosol, mitochondrion, nucleus	2.59	2.71
HORVU2Hr1G047750.4	Barley	plastid	2.16	2.21

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A287SFJ0	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU5Hr1G097600
EnsemblPlants:HORVU5Hr1G097600.1	InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF70	UniParc:UPI000B4669C0	InterPro:Znf_Dof	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:-:604981618..604982318

Molecular Weight (calculated)

20858.5 Da

IEP (calculated)

11.971

GRAVY (calculated)

-0.434

Length

232 amino acids

Sequence
(BLAST)

001: DPRTPRRHGH GPAPAAAAQV RRQRREPPRP RLAPHGAATH LLQPVPHVLL HLVALVHAAV ALGHVVAAGT GAAGPPGQEQ PPLRCPRCNS SNTKFCYYXX
101: YXLTQPRHFC KTCRRYWTKG GALRNVPIGG GCRNAAAPCR RPSPRRQPLR AXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXRPCAL QPGPPPPPPL
201: APPPPHCPPA TPHCPIAPVL LAAPTPQPPP LR

Best Arabidopsis Sequence Match ( AT5G65590.1 )
(BLAST)

001: MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP

Arabidopsis Description

DOF5.7SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.