Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G036700.2 | Wheat | nucleus | 95.89 | 95.63 |
| TraesCS1A01G035200.1 | Wheat | nucleus | 93.15 | 94.18 |
| TraesCS1B01G045000.3 | Wheat | nucleus | 94.52 | 94.01 |
| Os05t0112200-01 | Rice | nucleus | 58.9 | 74.14 |
| KXG21095 | Sorghum | nucleus | 65.21 | 61.82 |
| Zm00001d035651_P001 | Maize | nucleus | 61.64 | 61.64 |
| Zm00001d011058_P001 | Maize | nucleus | 52.88 | 57.1 |
| HORVU3Hr1G116220.1 | Barley | nucleus, plastid | 49.04 | 45.09 |
| Bra009587.1-P | Field mustard | nucleus | 21.1 | 43.5 |
| HORVU3Hr1G116260.1 | Barley | nucleus | 26.58 | 30.79 |
| KRH46814 | Soybean | nucleus | 30.41 | 30.25 |
| KRG99864 | Soybean | nucleus | 29.86 | 30.03 |
| HORVU5Hr1G021290.1 | Barley | nucleus | 28.22 | 29.86 |
| CDY40358 | Canola | nucleus | 26.85 | 29.43 |
| KRH70477 | Soybean | nucleus | 29.59 | 29.11 |
| HORVU5Hr1G113190.2 | Barley | nucleus, plastid | 22.74 | 29.02 |
| HORVU3Hr1G116270.2 | Barley | nucleus | 27.4 | 28.74 |
| CDY55549 | Canola | nucleus | 30.41 | 27.61 |
| AT5G02460.1 | Thale cress | nucleus | 29.86 | 27.32 |
| Bra005725.1-P | Field mustard | nucleus | 30.14 | 27.3 |
| Bra028872.1-P | Field mustard | nucleus | 30.14 | 27.09 |
| CDX80822 | Canola | nucleus | 30.14 | 27.09 |
| CDY04855 | Canola | nucleus | 30.14 | 27.09 |
| Solyc09g010680.2.1 | Tomato | nucleus | 29.32 | 26.88 |
| CDY70704 | Canola | nucleus | 26.85 | 26.85 |
| CDY55422 | Canola | nucleus | 29.32 | 26.68 |
| PGSC0003DMT400023033 | Potato | nucleus | 28.77 | 26.05 |
| HORVU5Hr1G113220.6 | Barley | nucleus | 31.23 | 25.33 |
| HORVU2Hr1G013060.1 | Barley | nucleus, plastid | 17.53 | 21.48 |
| HORVU5Hr1G097600.1 | Barley | nucleus, plastid | 13.42 | 21.12 |
| HORVU7Hr1G043250.2 | Barley | nucleus | 16.16 | 20.77 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 18.9 | 20.06 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 18.08 | 19.94 |
| HORVU5Hr1G048700.1 | Barley | nucleus | 15.34 | 16.82 |
| HORVU5Hr1G097620.1 | Barley | nucleus | 17.53 | 16.58 |
| HORVU6Hr1G065250.3 | Barley | nucleus | 18.9 | 14.68 |
| Bra009588.1-P | Field mustard | plastid | 6.85 | 14.04 |
| HORVU2Hr1G095390.1 | Barley | cytosol, mitochondrion, nucleus | 4.93 | 8.14 |
| HORVU2Hr1G047750.4 | Barley | plastid | 4.66 | 7.52 |
Protein Annotations
| MapMan:15.5.1.5 | UniProt:A0A287EIZ6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU1Hr1G005390 | EnsemblPlants:HORVU1Hr1G005390.2 |
| InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 |
| PANTHER:PTHR31992:SF59 | UniParc:UPI000B4728BD | InterPro:Znf_Dof | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr1H:+:11688849..11691046
Molecular Weight (calculated)
37724.2 Da
IEP (calculated)
8.229
GRAVY (calculated)
-0.405
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MIFPPSFLDS SSWNDNQLDF EQHAHHQQVI TAASCGGGGA GDGGCNNHDL LQPSIMQQGA LADGGDGGGQ VVGPAKPMSM SERARLARVP LPEQGLKCPR
101: CDSANTKFCY FNNYSLSQPR HFCRACRRYW TRGGALRNVP VGGGYRRHAK RAKPKQAAAA GAPAANGAAS GGSTTTSSTT SACTTMSNPA PVLPAMLQNG
201: GGGNLSGLLP PLLRLADFDA MSLGSTFSSM GKSSPVDSAA GYYLGGGGGG GAVAGLEQWR VQQMQGFPFF QAMADQQHTL APAAAPAMAM PGMFHYLGLG
301: NGGDGRGGHE DDGGDQQFHH AMPLSKREGY PRSGSIAMYG GDHHLTAGGG YTSSYSNTAT GNHLL
101: CDSANTKFCY FNNYSLSQPR HFCRACRRYW TRGGALRNVP VGGGYRRHAK RAKPKQAAAA GAPAANGAAS GGSTTTSSTT SACTTMSNPA PVLPAMLQNG
201: GGGNLSGLLP PLLRLADFDA MSLGSTFSSM GKSSPVDSAA GYYLGGGGGG GAVAGLEQWR VQQMQGFPFF QAMADQQHTL APAAAPAMAM PGMFHYLGLG
301: NGGDGRGGHE DDGGDQQFHH AMPLSKREGY PRSGSIAMYG GDHHLTAGGG YTSSYSNTAT GNHLL
001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.