Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY40358 | Canola | nucleus | 86.85 | 95.2 |
Bra009587.1-P | Field mustard | nucleus | 43.84 | 90.4 |
CDY04855 | Canola | nucleus | 87.67 | 78.82 |
Bra009588.1-P | Field mustard | plastid | 38.36 | 78.65 |
CDY55422 | Canola | nucleus | 86.03 | 78.3 |
CDY55549 | Canola | nucleus | 85.48 | 77.61 |
CDX80822 | Canola | nucleus | 85.48 | 76.85 |
AT5G02460.1 | Thale cress | nucleus | 82.74 | 75.69 |
CDY07781 | Canola | nucleus | 29.86 | 50.93 |
CDY70840 | Canola | nucleus | 14.79 | 47.79 |
CDX93365 | Canola | nucleus | 35.89 | 42.39 |
CDX79743 | Canola | nucleus | 33.97 | 42.32 |
CDX74947 | Canola | nucleus | 37.53 | 42.15 |
CDX91370 | Canola | nucleus | 37.26 | 41.85 |
CDY65260 | Canola | nucleus | 35.34 | 41.75 |
KRG99864 | Soybean | nucleus | 40.0 | 40.22 |
KRH46814 | Soybean | nucleus | 40.0 | 39.78 |
CDX73385 | Canola | nucleus | 31.78 | 38.41 |
Solyc09g010680.2.1 | Tomato | nucleus | 41.1 | 37.69 |
PGSC0003DMT400023033 | Potato | nucleus | 41.37 | 37.47 |
CDY69145 | Canola | nucleus, plastid | 32.05 | 37.14 |
CDY15624 | Canola | nucleus | 32.33 | 35.33 |
CDY40213 | Canola | nucleus | 32.88 | 33.8 |
KRH70477 | Soybean | nucleus | 34.25 | 33.69 |
CDX95139 | Canola | nucleus | 30.96 | 33.63 |
CDX77212 | Canola | nucleus | 31.23 | 33.53 |
CDX76102 | Canola | nucleus | 34.79 | 33.33 |
CDY31735 | Canola | nucleus | 31.23 | 33.14 |
CDY06274 | Canola | nucleus | 28.49 | 33.12 |
CDY61965 | Canola | nucleus | 27.67 | 32.48 |
Os05t0112200-01 | Rice | nucleus | 25.75 | 32.41 |
TraesCS4B01G206800.1 | Wheat | nucleus | 32.6 | 31.48 |
TraesCS4D01G207600.1 | Wheat | nucleus | 32.6 | 31.23 |
TraesCS4A01G097800.1 | Wheat | nucleus | 32.6 | 31.07 |
Os07t0236700-01 | Rice | nucleus | 29.59 | 30.59 |
CDY08775 | Canola | nucleus | 15.62 | 29.08 |
Zm00001d035651_P001 | Maize | nucleus | 28.77 | 28.77 |
Zm00001d011058_P001 | Maize | nucleus | 26.03 | 28.11 |
KXG21095 | Sorghum | nucleus | 29.04 | 27.53 |
HORVU3Hr1G116260.1 | Barley | nucleus | 23.29 | 26.98 |
HORVU1Hr1G005390.2 | Barley | nucleus | 26.85 | 26.85 |
CDY29082 | Canola | nucleus | 17.53 | 26.67 |
CDX90602 | Canola | nucleus | 17.53 | 26.56 |
CDX80191 | Canola | nucleus | 18.63 | 26.46 |
CDY16836 | Canola | nucleus | 19.18 | 26.22 |
CDY53379 | Canola | nucleus | 15.62 | 26.03 |
CDY31568 | Canola | nucleus | 18.36 | 25.97 |
HORVU3Hr1G116220.1 | Barley | nucleus, plastid | 28.22 | 25.94 |
CDX78095 | Canola | nucleus | 16.99 | 25.62 |
CDX87189 | Canola | nucleus | 17.53 | 25.6 |
HORVU3Hr1G116270.2 | Barley | nucleus | 24.38 | 25.57 |
CDY09221 | Canola | nucleus | 17.81 | 25.19 |
CDY59600 | Canola | nucleus | 16.71 | 25.0 |
CDX71050 | Canola | nucleus | 17.26 | 24.9 |
CDY02191 | Canola | nucleus | 19.45 | 24.15 |
CDX88742 | Canola | nucleus | 18.08 | 23.83 |
CDY40813 | Canola | nucleus | 18.36 | 23.67 |
CDX77184 | Canola | nucleus | 16.44 | 23.44 |
CDY70666 | Canola | nucleus | 18.9 | 23.23 |
CDY70838 | Canola | nucleus | 19.45 | 23.2 |
CDY42836 | Canola | nucleus | 18.08 | 23.08 |
CDY72049 | Canola | nucleus | 18.63 | 22.9 |
CDY70312 | Canola | nucleus | 17.81 | 22.89 |
CDY33948 | Canola | nucleus | 18.9 | 22.85 |
CDY51722 | Canola | nucleus | 17.26 | 22.66 |
CDY07156 | Canola | nucleus | 17.26 | 22.58 |
CDY37834 | Canola | nucleus | 18.63 | 22.37 |
CDX81292 | Canola | nucleus | 17.26 | 22.34 |
CDY35454 | Canola | nucleus | 20.0 | 21.34 |
CDY72657 | Canola | nucleus | 16.99 | 21.23 |
CDY00373 | Canola | nucleus | 15.07 | 21.15 |
CDY66590 | Canola | nucleus | 18.9 | 21.1 |
CDX86775 | Canola | nucleus | 17.81 | 20.9 |
CDY15678 | Canola | nucleus | 18.63 | 20.8 |
CDY64622 | Canola | nucleus | 18.36 | 20.74 |
CDY61064 | Canola | nucleus | 14.79 | 20.69 |
CDX71704 | Canola | nucleus | 18.9 | 20.6 |
CDY71684 | Canola | nucleus | 18.9 | 20.6 |
CDY50231 | Canola | nucleus | 14.25 | 20.55 |
CDY41539 | Canola | nucleus | 20.55 | 20.49 |
CDY04620 | Canola | nucleus | 14.25 | 20.47 |
CDY03494 | Canola | nucleus | 19.18 | 20.35 |
CDX80030 | Canola | nucleus | 20.27 | 20.33 |
CDY71763 | Canola | nucleus | 18.9 | 20.12 |
CDX92613 | Canola | nucleus | 18.9 | 20.12 |
CDY35729 | Canola | nucleus | 16.44 | 20.07 |
CDX90142 | Canola | nucleus | 17.26 | 19.94 |
CDY57876 | Canola | nucleus | 19.45 | 19.67 |
CDX89134 | Canola | extracellular, vacuole | 18.63 | 19.54 |
CDY08392 | Canola | nucleus | 18.08 | 19.53 |
CDX83357 | Canola | nucleus | 19.45 | 18.98 |
CDY61727 | Canola | nucleus | 19.45 | 18.98 |
CDX95706 | Canola | nucleus | 19.18 | 18.97 |
CDY27314 | Canola | nucleus | 18.36 | 18.61 |
CDY16754 | Canola | nucleus | 17.26 | 18.53 |
CDX87270 | Canola | nucleus | 17.26 | 18.48 |
CDY00341 | Canola | nucleus | 18.36 | 18.21 |
CDX84369 | Canola | nucleus | 18.36 | 18.06 |
CDY24798 | Canola | nucleus | 19.73 | 15.89 |
CDY08776 | Canola | nucleus | 2.47 | 10.47 |
Protein Annotations
MapMan:15.5.1.5 | GO:A0A078JV78 | UniProt:A0A078JV78 | EnsemblPlants:CDY70704 | ProteinID:CDY70704 | ProteinID:CDY70704.1 |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00006886001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI0004EDBCBC | InterPro:Znf_Dof |
SEG:seg | : | : | : | : | : |
Description
BnaCnng69430DBnaCnng69430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JV78]
Coordinates
chrLK042996:-:1585..3018
Molecular Weight (calculated)
39263.2 Da
IEP (calculated)
9.092
GRAVY (calculated)
-0.708
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSFPTYP DSSNWQQQHQ PITSTVGFTG NNNNISQQFL PHHPLPPQPQ QTPPPLHHNA NGAGGGGSGG PSGLIRPGSM AERARLANIP LPETALKCPR
101: CDSSNTKFCY FNNYSLTQPR HFCKSCRRYW TCGGALRSVP VGGGCRRNKR TKNSGGGGGS SSSGNSKSQD STTSNDQYHH RAMASNQMGP PSSSTSLSSL
201: LSSYNAGLIP GHNQSNNVHG LGSSLTPLKL MTPLDFTDNF TLPFDQWRFP ATHQQLPLLG GLDNSSSSGL YPFDHQNQTG MHQQNPKNTF YDLSSASSAM
301: VTATASQLAS VKMEDSNNQL NMSKQLFGNE QHLWNFHGAA RSTAATTCSW SDASNNFSSS STSNI
101: CDSSNTKFCY FNNYSLTQPR HFCKSCRRYW TCGGALRSVP VGGGCRRNKR TKNSGGGGGS SSSGNSKSQD STTSNDQYHH RAMASNQMGP PSSSTSLSSL
201: LSSYNAGLIP GHNQSNNVHG LGSSLTPLKL MTPLDFTDNF TLPFDQWRFP ATHQQLPLLG GLDNSSSSGL YPFDHQNQTG MHQQNPKNTF YDLSSASSAM
301: VTATASQLAS VKMEDSNNQL NMSKQLFGNE QHLWNFHGAA RSTAATTCSW SDASNNFSSS STSNI
001: MVFSSFPTYP DHSSNWQQQH QPITTTVGFT GNNINQQFLP HHPLPPQQQQ TPPQLHHNNG NGGVAVPGGP GGLIRPGSMA ERARLANIPL PETALKCPRC
101: DSTNTKFCYF NNYSLTQPRH FCKACRRYWT RGGALRSVPV GGGCRRNKRT KNSSGGGGGS TSSGNSKSQD SATSNDQYHH RAMANNQMGP PSSSSSLSSL
201: LSSYNAGLIP GHDHNSNNNN ILGLGSSLPP LKLMPPLDFT DNFTLQYGAV SAPSYHIGGG SSGGAAALLN GFDQWRFPAT NQLPLGGLDP FDQQHQMEQQ
301: NPGYGLVTGS GQYRPKNIFH NLISSSSSAS SAMVTATASQ LASVKMEDSN NQLNLSRQLF GDEQQLWNIH GAAAASTAAA TSSWSEVSNN FSSSSTSNI
101: DSTNTKFCYF NNYSLTQPRH FCKACRRYWT RGGALRSVPV GGGCRRNKRT KNSSGGGGGS TSSGNSKSQD SATSNDQYHH RAMANNQMGP PSSSSSLSSL
201: LSSYNAGLIP GHDHNSNNNN ILGLGSSLPP LKLMPPLDFT DNFTLQYGAV SAPSYHIGGG SSGGAAALLN GFDQWRFPAT NQLPLGGLDP FDQQHQMEQQ
301: NPGYGLVTGS GQYRPKNIFH NLISSSSSAS SAMVTATASQ LASVKMEDSN NQLNLSRQLF GDEQQLWNIH GAAAASTAAA TSSWSEVSNN FSSSSTSNI
Arabidopsis Description
DOF5.1Dof zinc finger protein DOF5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZ56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.