Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra020261.1-P | Field mustard | nucleus | 91.47 | 99.16 |
CDX71050 | Canola | nucleus | 86.43 | 88.14 |
CDY31568 | Canola | nucleus | 86.05 | 86.05 |
AT5G60200.1 | Thale cress | nucleus | 84.11 | 84.44 |
CDX80191 | Canola | nucleus | 84.11 | 84.44 |
CDX88742 | Canola | nucleus | 84.5 | 78.7 |
AT3G45610.1 | Thale cress | nucleus | 66.28 | 69.8 |
CDY70840 | Canola | nucleus | 22.48 | 51.33 |
CDY53379 | Canola | nucleus | 27.91 | 32.88 |
CDX77184 | Canola | nucleus | 27.52 | 27.73 |
CDY08775 | Canola | nucleus | 20.54 | 27.04 |
CDY07781 | Canola | nucleus | 21.71 | 26.17 |
CDY29082 | Canola | nucleus | 23.26 | 25.0 |
CDX90602 | Canola | nucleus | 23.26 | 24.9 |
CDY50231 | Canola | nucleus | 24.03 | 24.51 |
CDY04620 | Canola | nucleus | 24.03 | 24.41 |
CDX87189 | Canola | nucleus | 23.64 | 24.4 |
CDY51722 | Canola | nucleus | 25.97 | 24.1 |
CDY07156 | Canola | nucleus | 25.97 | 24.01 |
CDX78095 | Canola | nucleus | 22.48 | 23.97 |
CDY00373 | Canola | nucleus | 23.64 | 23.46 |
CDY59600 | Canola | nucleus | 22.09 | 23.36 |
CDY61064 | Canola | nucleus | 23.26 | 22.99 |
CDY16836 | Canola | nucleus | 23.64 | 22.85 |
KRH50082 | Soybean | nucleus | 24.81 | 22.22 |
CDY02191 | Canola | nucleus | 24.03 | 21.09 |
CDX86775 | Canola | nucleus | 25.19 | 20.9 |
CDY40813 | Canola | nucleus | 22.87 | 20.85 |
CDY64622 | Canola | nucleus | 25.97 | 20.74 |
CDY35729 | Canola | nucleus | 24.03 | 20.74 |
CDY08392 | Canola | nucleus | 27.13 | 20.71 |
VIT_00s0652g00010.t01 | Wine grape | nucleus | 23.64 | 20.68 |
CDY70666 | Canola | nucleus | 23.64 | 20.54 |
CDX71704 | Canola | nucleus | 26.36 | 20.3 |
CDY16754 | Canola | nucleus | 26.74 | 20.29 |
CDY42836 | Canola | nucleus | 22.48 | 20.28 |
GSMUA_Achr1P17670_001 | Banana | nucleus | 17.05 | 20.28 |
CDY70838 | Canola | nucleus | 24.03 | 20.26 |
CDX87270 | Canola | nucleus | 26.74 | 20.23 |
CDY41539 | Canola | nucleus | 28.68 | 20.22 |
CDX84369 | Canola | nucleus | 29.07 | 20.22 |
CDY72049 | Canola | nucleus | 23.26 | 20.2 |
CDY33948 | Canola | nucleus | 23.64 | 20.2 |
CDX79743 | Canola | nucleus | 22.87 | 20.14 |
CDY00341 | Canola | nucleus | 28.68 | 20.11 |
CDY37834 | Canola | nucleus | 23.64 | 20.07 |
CDX80030 | Canola | nucleus | 28.29 | 20.05 |
CDX90142 | Canola | nucleus | 24.03 | 19.62 |
CDX73385 | Canola | nucleus | 22.87 | 19.54 |
CDX93365 | Canola | nucleus | 23.26 | 19.42 |
CDY70312 | Canola | nucleus | 21.32 | 19.37 |
CDY69145 | Canola | nucleus, plastid | 23.64 | 19.37 |
CDX89134 | Canola | extracellular, vacuole | 25.97 | 19.25 |
CDX95706 | Canola | nucleus | 27.52 | 19.24 |
KRH20417 | Soybean | nucleus | 24.42 | 19.21 |
CDY72657 | Canola | nucleus | 21.71 | 19.18 |
CDY71684 | Canola | nucleus | 24.81 | 19.1 |
CDY65260 | Canola | nucleus | 22.87 | 19.09 |
Zm00001d029512_P001 | Maize | nucleus | 25.97 | 19.09 |
Solyc02g078620.1.1 | Tomato | nucleus | 20.93 | 19.01 |
CDX83357 | Canola | nucleus | 27.52 | 18.98 |
CDY40358 | Canola | nucleus | 24.42 | 18.92 |
CDY57876 | Canola | nucleus | 26.36 | 18.84 |
CDX91370 | Canola | nucleus | 23.64 | 18.77 |
CDX74947 | Canola | nucleus | 23.64 | 18.77 |
CDY35454 | Canola | nucleus | 24.81 | 18.71 |
CDX92613 | Canola | nucleus | 24.81 | 18.66 |
CDY71763 | Canola | nucleus | 24.81 | 18.66 |
CDY66590 | Canola | nucleus | 23.64 | 18.65 |
CDY03494 | Canola | nucleus | 24.81 | 18.6 |
CDY61727 | Canola | nucleus | 26.74 | 18.45 |
CDY15678 | Canola | nucleus | 23.26 | 18.35 |
CDY27314 | Canola | nucleus | 25.58 | 18.33 |
CDY15624 | Canola | nucleus | 23.26 | 17.96 |
CDY70704 | Canola | nucleus | 25.19 | 17.81 |
GSMUA_Achr5P12010_001 | Banana | nucleus | 24.42 | 17.75 |
CDX81292 | Canola | nucleus | 19.38 | 17.73 |
CDX77212 | Canola | nucleus | 23.26 | 17.65 |
CDY31735 | Canola | nucleus | 23.26 | 17.44 |
CDY40213 | Canola | nucleus | 23.26 | 16.9 |
CDX95139 | Canola | nucleus | 21.71 | 16.67 |
CDX76102 | Canola | nucleus | 24.42 | 16.54 |
CDY61965 | Canola | nucleus | 19.38 | 16.08 |
CDY55549 | Canola | nucleus | 24.42 | 15.67 |
CDX80822 | Canola | nucleus | 24.42 | 15.52 |
CDY55422 | Canola | nucleus | 24.03 | 15.46 |
CDY06274 | Canola | nucleus | 18.6 | 15.29 |
CDY04855 | Canola | nucleus | 23.64 | 15.02 |
CDY24798 | Canola | nucleus | 24.03 | 13.69 |
CDY08776 | Canola | nucleus | 3.1 | 9.3 |
Os03t0276300-00 | Rice | cytosol | 1.55 | 2.88 |
Protein Annotations
MapMan:15.5.1.5 | GO:A0A078F757 | UniProt:A0A078F757 | EnsemblPlants:CDY09221 | ProteinID:CDY09221 | ProteinID:CDY09221.1 |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00001472001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF78 | UniParc:UPI0004EE420F | InterPro:Znf_Dof |
SEG:seg | : | : | : | : | : |
Description
BnaA02g06470DBnaA02g06470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F757]
Coordinates
chrLK031993:-:797031..798329
Molecular Weight (calculated)
28122.7 Da
IEP (calculated)
8.472
GRAVY (calculated)
-0.737
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQLLHHQDV YGNYNKAREA MGVPCSSNPT QLDHDQKKPS PATGAARPQP PELSLRCPRC DSTNTKFCYY NNYSLSQPRY FCKSCKRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSATRSLRT TPEPASHDGK AFSAASFGGF GNNEHIDLSL AFALLNKQPP GSSSQLGFPS EFGSSHQSDM ESVFATSQQK ENTGYVFGNG
201: SSGLEMAMSD PNKVLWGFPW QVNGEMNMGG GGGGHVDHID SGREIWTNMN YINSGALM
101: GGGCRKNKRS TSSATRSLRT TPEPASHDGK AFSAASFGGF GNNEHIDLSL AFALLNKQPP GSSSQLGFPS EFGSSHQSDM ESVFATSQQK ENTGYVFGNG
201: SSGLEMAMSD PNKVLWGFPW QVNGEMNMGG GGGGHVDHID SGREIWTNMN YINSGALM
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.