Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020261.1-P Field mustard nucleus 91.47 99.16
CDX71050 Canola nucleus 86.43 88.14
CDY31568 Canola nucleus 86.05 86.05
AT5G60200.1 Thale cress nucleus 84.11 84.44
CDX80191 Canola nucleus 84.11 84.44
CDX88742 Canola nucleus 84.5 78.7
AT3G45610.1 Thale cress nucleus 66.28 69.8
CDY70840 Canola nucleus 22.48 51.33
CDY53379 Canola nucleus 27.91 32.88
CDX77184 Canola nucleus 27.52 27.73
CDY08775 Canola nucleus 20.54 27.04
CDY07781 Canola nucleus 21.71 26.17
CDY29082 Canola nucleus 23.26 25.0
CDX90602 Canola nucleus 23.26 24.9
CDY50231 Canola nucleus 24.03 24.51
CDY04620 Canola nucleus 24.03 24.41
CDX87189 Canola nucleus 23.64 24.4
CDY51722 Canola nucleus 25.97 24.1
CDY07156 Canola nucleus 25.97 24.01
CDX78095 Canola nucleus 22.48 23.97
CDY00373 Canola nucleus 23.64 23.46
CDY59600 Canola nucleus 22.09 23.36
CDY61064 Canola nucleus 23.26 22.99
CDY16836 Canola nucleus 23.64 22.85
KRH50082 Soybean nucleus 24.81 22.22
CDY02191 Canola nucleus 24.03 21.09
CDX86775 Canola nucleus 25.19 20.9
CDY40813 Canola nucleus 22.87 20.85
CDY64622 Canola nucleus 25.97 20.74
CDY35729 Canola nucleus 24.03 20.74
CDY08392 Canola nucleus 27.13 20.71
VIT_00s0652g00010.t01 Wine grape nucleus 23.64 20.68
CDY70666 Canola nucleus 23.64 20.54
CDX71704 Canola nucleus 26.36 20.3
CDY16754 Canola nucleus 26.74 20.29
CDY42836 Canola nucleus 22.48 20.28
GSMUA_Achr1P17670_001 Banana nucleus 17.05 20.28
CDY70838 Canola nucleus 24.03 20.26
CDX87270 Canola nucleus 26.74 20.23
CDY41539 Canola nucleus 28.68 20.22
CDX84369 Canola nucleus 29.07 20.22
CDY72049 Canola nucleus 23.26 20.2
CDY33948 Canola nucleus 23.64 20.2
CDX79743 Canola nucleus 22.87 20.14
CDY00341 Canola nucleus 28.68 20.11
CDY37834 Canola nucleus 23.64 20.07
CDX80030 Canola nucleus 28.29 20.05
CDX90142 Canola nucleus 24.03 19.62
CDX73385 Canola nucleus 22.87 19.54
CDX93365 Canola nucleus 23.26 19.42
CDY70312 Canola nucleus 21.32 19.37
CDY69145 Canola nucleus, plastid 23.64 19.37
CDX89134 Canola extracellular, vacuole 25.97 19.25
CDX95706 Canola nucleus 27.52 19.24
KRH20417 Soybean nucleus 24.42 19.21
CDY72657 Canola nucleus 21.71 19.18
CDY71684 Canola nucleus 24.81 19.1
CDY65260 Canola nucleus 22.87 19.09
Zm00001d029512_P001 Maize nucleus 25.97 19.09
Solyc02g078620.1.1 Tomato nucleus 20.93 19.01
CDX83357 Canola nucleus 27.52 18.98
CDY40358 Canola nucleus 24.42 18.92
CDY57876 Canola nucleus 26.36 18.84
CDX91370 Canola nucleus 23.64 18.77
CDX74947 Canola nucleus 23.64 18.77
CDY35454 Canola nucleus 24.81 18.71
CDX92613 Canola nucleus 24.81 18.66
CDY71763 Canola nucleus 24.81 18.66
CDY66590 Canola nucleus 23.64 18.65
CDY03494 Canola nucleus 24.81 18.6
CDY61727 Canola nucleus 26.74 18.45
CDY15678 Canola nucleus 23.26 18.35
CDY27314 Canola nucleus 25.58 18.33
CDY15624 Canola nucleus 23.26 17.96
CDY70704 Canola nucleus 25.19 17.81
GSMUA_Achr5P12010_001 Banana nucleus 24.42 17.75
CDX81292 Canola nucleus 19.38 17.73
CDX77212 Canola nucleus 23.26 17.65
CDY31735 Canola nucleus 23.26 17.44
CDY40213 Canola nucleus 23.26 16.9
CDX95139 Canola nucleus 21.71 16.67
CDX76102 Canola nucleus 24.42 16.54
CDY61965 Canola nucleus 19.38 16.08
CDY55549 Canola nucleus 24.42 15.67
CDX80822 Canola nucleus 24.42 15.52
CDY55422 Canola nucleus 24.03 15.46
CDY06274 Canola nucleus 18.6 15.29
CDY04855 Canola nucleus 23.64 15.02
CDY24798 Canola nucleus 24.03 13.69
CDY08776 Canola nucleus 3.1 9.3
Os03t0276300-00 Rice cytosol 1.55 2.88
Protein Annotations
MapMan:15.5.1.5GO:A0A078F757UniProt:A0A078F757EnsemblPlants:CDY09221ProteinID:CDY09221ProteinID:CDY09221.1
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00001472001InterPro:IPR003851PFAM:PD007478PFAM:PF02701
ScanProsite:PS01361PFscan:PS50884PANTHER:PTHR31992PANTHER:PTHR31992:SF78UniParc:UPI0004EE420FInterPro:Znf_Dof
SEG:seg:::::
Description
BnaA02g06470DBnaA02g06470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F757]
Coordinates
chrLK031993:-:797031..798329
Molecular Weight (calculated)
28122.7 Da
IEP (calculated)
8.472
GRAVY (calculated)
-0.737
Length
258 amino acids
Sequence
(BLAST)
001: MDQLLHHQDV YGNYNKAREA MGVPCSSNPT QLDHDQKKPS PATGAARPQP PELSLRCPRC DSTNTKFCYY NNYSLSQPRY FCKSCKRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSATRSLRT TPEPASHDGK AFSAASFGGF GNNEHIDLSL AFALLNKQPP GSSSQLGFPS EFGSSHQSDM ESVFATSQQK ENTGYVFGNG
201: SSGLEMAMSD PNKVLWGFPW QVNGEMNMGG GGGGHVDHID SGREIWTNMN YINSGALM
Best Arabidopsis Sequence Match ( AT5G60200.1 )
(BLAST)
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.