Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- nucleus 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY07781 | Canola | nucleus | 69.28 | 94.86 |
Bra000008.1-P | Field mustard | nucleus | 94.2 | 94.2 |
CDX74947 | Canola | nucleus | 90.44 | 81.54 |
CDX91370 | Canola | nucleus | 89.76 | 80.92 |
CDX93365 | Canola | nucleus | 82.25 | 77.99 |
CDY65260 | Canola | nucleus | 81.23 | 77.02 |
AT2G37590.1 | Thale cress | nucleus | 83.96 | 74.55 |
CDY70840 | Canola | nucleus | 18.77 | 48.67 |
VIT_08s0007g00180.t01 | Wine grape | nucleus | 46.08 | 39.13 |
Zm00001d034653_P001 | Maize | nucleus | 29.35 | 38.39 |
CDX73385 | Canola | nucleus | 35.84 | 34.77 |
CDY70704 | Canola | nucleus | 42.32 | 33.97 |
CDY40358 | Canola | nucleus | 38.57 | 33.93 |
Solyc10g086440.1.1 | Tomato | nucleus | 40.96 | 33.15 |
CDY55549 | Canola | nucleus | 45.39 | 33.08 |
CDX80822 | Canola | nucleus | 45.73 | 33.0 |
CDY55422 | Canola | nucleus | 45.05 | 32.92 |
PGSC0003DMT400049288 | Potato | nucleus | 41.3 | 32.35 |
CDY04855 | Canola | nucleus | 44.71 | 32.27 |
CDY69145 | Canola | nucleus, plastid | 33.79 | 31.43 |
HORVU5Hr1G113190.2 | Barley | nucleus, plastid | 30.03 | 30.77 |
CDY15624 | Canola | nucleus | 34.47 | 30.24 |
Zm00001d034651_P002 | Maize | nucleus | 41.98 | 29.78 |
CDX95139 | Canola | nucleus | 34.13 | 29.76 |
CDY40213 | Canola | nucleus | 35.84 | 29.58 |
CDY06274 | Canola | nucleus | 31.06 | 28.98 |
Os03t0821200-00 | Rice | nucleus | 40.61 | 28.74 |
CDY61965 | Canola | nucleus | 30.38 | 28.62 |
KXG37254 | Sorghum | nucleus | 41.98 | 28.28 |
CDX77212 | Canola | nucleus | 32.76 | 28.24 |
CDX76102 | Canola | nucleus | 36.18 | 27.82 |
CDY31735 | Canola | nucleus | 32.42 | 27.62 |
CDY08775 | Canola | nucleus | 18.43 | 27.55 |
CDY53379 | Canola | nucleus | 20.48 | 27.4 |
HORVU5Hr1G113220.6 | Barley | nucleus | 41.3 | 26.89 |
TraesCS5B01G492600.1 | Wheat | nucleus | 40.61 | 26.33 |
TraesCS5D01G493000.1 | Wheat | nucleus | 40.27 | 25.93 |
TraesCS5A01G479400.1 | Wheat | nucleus | 40.96 | 25.7 |
CDY29082 | Canola | nucleus | 20.82 | 25.42 |
CDX90602 | Canola | nucleus | 20.82 | 25.31 |
CDX77184 | Canola | nucleus | 21.5 | 24.61 |
CDY59600 | Canola | nucleus | 20.14 | 24.18 |
CDY31568 | Canola | nucleus | 21.16 | 24.03 |
CDX80191 | Canola | nucleus | 20.82 | 23.74 |
CDX78095 | Canola | nucleus | 19.45 | 23.55 |
CDY72657 | Canola | nucleus | 22.87 | 22.95 |
CDY09221 | Canola | nucleus | 20.14 | 22.87 |
CDY04620 | Canola | nucleus | 19.45 | 22.44 |
CDX71050 | Canola | nucleus | 19.11 | 22.13 |
CDY16836 | Canola | nucleus | 20.14 | 22.1 |
CDY71684 | Canola | nucleus | 25.26 | 22.09 |
CDX87189 | Canola | nucleus | 18.77 | 22.0 |
CDY40813 | Canola | nucleus | 21.16 | 21.91 |
CDY03494 | Canola | nucleus | 25.6 | 21.8 |
CDY02191 | Canola | nucleus | 21.84 | 21.77 |
CDY16754 | Canola | nucleus | 25.26 | 21.76 |
CDY50231 | Canola | nucleus | 18.77 | 21.74 |
CDX87270 | Canola | nucleus | 25.26 | 21.7 |
CDX92613 | Canola | nucleus | 25.26 | 21.57 |
CDY71763 | Canola | nucleus | 25.26 | 21.57 |
CDY70666 | Canola | nucleus | 21.84 | 21.55 |
CDY42836 | Canola | nucleus | 20.82 | 21.33 |
CDY51722 | Canola | nucleus | 20.14 | 21.22 |
CDY72049 | Canola | nucleus | 21.5 | 21.21 |
CDY33948 | Canola | nucleus | 21.84 | 21.19 |
CDY70312 | Canola | nucleus | 20.48 | 21.13 |
CDY70838 | Canola | nucleus | 21.84 | 20.91 |
CDY07156 | Canola | nucleus | 19.8 | 20.79 |
CDY00373 | Canola | nucleus | 18.43 | 20.77 |
CDY37834 | Canola | nucleus | 21.5 | 20.72 |
CDX86775 | Canola | nucleus | 21.84 | 20.58 |
CDX88742 | Canola | nucleus | 19.45 | 20.58 |
CDY35454 | Canola | nucleus | 23.89 | 20.47 |
CDY08392 | Canola | nucleus | 23.55 | 20.41 |
CDY61064 | Canola | nucleus | 18.09 | 20.31 |
CDX81292 | Canola | nucleus | 19.45 | 20.21 |
CDY64622 | Canola | nucleus | 22.18 | 20.12 |
CDY15678 | Canola | nucleus | 22.18 | 19.88 |
CDY66590 | Canola | nucleus | 22.18 | 19.88 |
CDX71704 | Canola | nucleus | 22.53 | 19.7 |
CDY00341 | Canola | nucleus | 24.57 | 19.57 |
CDX84369 | Canola | nucleus | 24.23 | 19.14 |
CDY57876 | Canola | nucleus | 23.55 | 19.11 |
CDY35729 | Canola | nucleus | 19.45 | 19.06 |
CDX90142 | Canola | nucleus | 20.48 | 18.99 |
CDX89134 | Canola | extracellular, vacuole | 22.53 | 18.97 |
CDY41539 | Canola | nucleus | 23.55 | 18.85 |
CDX95706 | Canola | nucleus | 23.55 | 18.7 |
CDX80030 | Canola | nucleus | 23.21 | 18.68 |
Zm00001d012963_P001 | Maize | plastid, vacuole | 39.93 | 18.63 |
CDX83357 | Canola | nucleus | 23.55 | 18.45 |
CDY61727 | Canola | nucleus | 22.87 | 17.91 |
CDY27314 | Canola | nucleus | 21.84 | 17.78 |
CDY24798 | Canola | nucleus | 25.26 | 16.34 |
CDY08776 | Canola | nucleus | 2.73 | 9.3 |
HORVU2Hr1G095390.1 | Barley | cytosol, mitochondrion, nucleus | 4.78 | 6.33 |
Protein Annotations
MapMan:15.5.1.5 | GO:A0A078CX78 | EnsemblPlants:CDX79743 | ProteinID:CDX79743 | ProteinID:CDX79743.1 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00132564001 | InterPro:IPR003851 | PFAM:PD007478 |
PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI0004EEA8E1 |
InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaC03g20790D
Coordinates
chrLK031818:+:2053270..2054458
Molecular Weight (calculated)
31401.0 Da
IEP (calculated)
8.883
GRAVY (calculated)
-0.671
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFFSIQAYP DSSNWQQAPP NNHNQGGAGA SDTGGHGICP QPQSNGSGGS GSIRPGSMVD RARQANVAMP EAALKCPRCE STNTKFCYFN NYSLTQPRHF
101: CKSCRRYWTR GGSLRNVPVG GGYRRNRHTK SSSNNNNSTA TSNNTSFSSA ASGNASTINA ILSPNYGGNH ESILSQILYP GRVMNPNYNH HLGDLLDNTK
201: TDNNMSLLNY GGLSQDLRSV HMGTSGGSLM SCVDPSSNGF YPFESPRTTS TSISSALASQ FSSVKVEDNP YKWVNVNGNC SSWIDLSTFG SSS
101: CKSCRRYWTR GGSLRNVPVG GGYRRNRHTK SSSNNNNSTA TSNNTSFSSA ASGNASTINA ILSPNYGGNH ESILSQILYP GRVMNPNYNH HLGDLLDNTK
201: TDNNMSLLNY GGLSQDLRSV HMGTSGGSLM SCVDPSSNGF YPFESPRTTS TSISSALASQ FSSVKVEDNP YKWVNVNGNC SSWIDLSTFG SSS
001: MVFSSIQAYL DSSNWQQAPP SNYNHDGTGA SANGGHVLRP QLQPQQQPQQ QPHPNGSGGG GGGGGGSIRA GSMVDRARQA NVALPEAALK CPRCESTNTK
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
Arabidopsis Description
DOF2.4Dof zinc finger protein DOF2.4 [Source:UniProtKB/Swiss-Prot;Acc:O80928]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.