Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032891.1-P | Field mustard | nucleus | 99.66 | 99.66 |
| CDY72049 | Canola | nucleus | 96.97 | 96.97 |
| CDX90142 | Canola | nucleus | 82.83 | 77.85 |
| AT1G28310.2 | Thale cress | nucleus | 87.21 | 77.31 |
| CDY35729 | Canola | nucleus | 77.78 | 77.26 |
| CDY66590 | Canola | nucleus | 84.85 | 77.06 |
| CDY15678 | Canola | nucleus | 84.51 | 76.76 |
| CDY70840 | Canola | nucleus | 15.15 | 39.82 |
| CDY08775 | Canola | nucleus | 19.19 | 29.08 |
| CDY07781 | Canola | nucleus | 19.53 | 27.1 |
| VIT_10s0003g00040.t01 | Wine grape | nucleus | 25.59 | 24.68 |
| CDY53379 | Canola | nucleus | 18.18 | 24.66 |
| CDX73385 | Canola | nucleus | 24.92 | 24.5 |
| CDY31568 | Canola | nucleus | 21.21 | 24.42 |
| KRH10907 | Soybean | nucleus | 28.62 | 24.08 |
| CDY69145 | Canola | nucleus, plastid | 25.25 | 23.81 |
| CDY09221 | Canola | nucleus | 20.54 | 23.64 |
| CDY51722 | Canola | nucleus | 21.89 | 23.38 |
| CDY15624 | Canola | nucleus | 26.26 | 23.35 |
| CDX80191 | Canola | nucleus | 20.2 | 23.35 |
| CDX71050 | Canola | nucleus | 19.87 | 23.32 |
| CDY07156 | Canola | nucleus | 21.89 | 23.3 |
| KRH21402 | Soybean | nucleus | 27.61 | 22.97 |
| CDY70312 | Canola | nucleus | 21.89 | 22.89 |
| CDX87189 | Canola | nucleus | 18.86 | 22.4 |
| CDX88742 | Canola | nucleus | 20.88 | 22.38 |
| CDY37834 | Canola | nucleus | 22.9 | 22.37 |
| CDX81292 | Canola | nucleus | 21.21 | 22.34 |
| CDY33948 | Canola | nucleus | 22.56 | 22.19 |
| CDY70838 | Canola | nucleus | 22.56 | 21.9 |
| CDX79743 | Canola | nucleus | 21.55 | 21.84 |
| CDY40213 | Canola | nucleus | 25.93 | 21.69 |
| CDX93365 | Canola | nucleus | 22.22 | 21.36 |
| CDY29082 | Canola | nucleus | 17.17 | 21.25 |
| CDY61965 | Canola | nucleus | 22.22 | 21.22 |
| CDX86775 | Canola | nucleus | 22.22 | 21.22 |
| CDY65260 | Canola | nucleus | 21.89 | 21.04 |
| CDY06274 | Canola | nucleus | 22.22 | 21.02 |
| CDY16836 | Canola | nucleus | 18.86 | 20.97 |
| CDX91370 | Canola | nucleus | 22.9 | 20.92 |
| CDX74947 | Canola | nucleus | 22.9 | 20.92 |
| CDY40813 | Canola | nucleus | 19.87 | 20.85 |
| CDX90602 | Canola | nucleus | 16.84 | 20.75 |
| CDY31735 | Canola | nucleus | 23.91 | 20.64 |
| CDY42836 | Canola | nucleus | 19.87 | 20.63 |
| CDX77212 | Canola | nucleus | 23.57 | 20.59 |
| CDY41539 | Canola | nucleus | 25.25 | 20.49 |
| CDY59600 | Canola | nucleus | 16.84 | 20.49 |
| GSMUA_Achr10P... | Banana | nucleus | 23.91 | 20.4 |
| EER97271 | Sorghum | nucleus | 24.24 | 20.34 |
| CDX80030 | Canola | nucleus | 24.92 | 20.33 |
| CDX77184 | Canola | nucleus | 17.51 | 20.31 |
| CDX78095 | Canola | nucleus | 16.5 | 20.25 |
| CDX95139 | Canola | nucleus | 22.9 | 20.24 |
| CDY50231 | Canola | nucleus | 17.17 | 20.16 |
| CDY64622 | Canola | nucleus | 21.89 | 20.12 |
| CDY04620 | Canola | nucleus | 17.17 | 20.08 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 23.91 | 20.0 |
| CDY00373 | Canola | nucleus | 17.51 | 20.0 |
| CDX71704 | Canola | nucleus | 22.56 | 20.0 |
| CDX76102 | Canola | nucleus | 25.59 | 19.95 |
| TraesCS2D01G231600.1 | Wheat | nucleus | 23.91 | 19.94 |
| TraesCS2A01G225900.1 | Wheat | nucleus, plastid | 23.91 | 19.94 |
| CDY02191 | Canola | nucleus | 19.53 | 19.73 |
| Zm00001d021591_P001 | Maize | nucleus | 23.91 | 19.72 |
| CDY61064 | Canola | nucleus | 17.17 | 19.54 |
| CDX89134 | Canola | extracellular, vacuole | 22.9 | 19.54 |
| CDY40358 | Canola | nucleus | 21.89 | 19.52 |
| CDY27314 | Canola | nucleus | 23.57 | 19.44 |
| CDY72657 | Canola | nucleus | 18.86 | 19.18 |
| PGSC0003DMT400076447 | Potato | nucleus | 25.59 | 19.1 |
| Solyc02g077950.1.1 | Tomato | nucleus | 24.24 | 19.0 |
| CDY61727 | Canola | nucleus | 23.91 | 18.98 |
| CDX83357 | Canola | nucleus | 23.91 | 18.98 |
| CDX95706 | Canola | nucleus | 23.57 | 18.97 |
| CDY08392 | Canola | nucleus | 21.55 | 18.93 |
| CDY70704 | Canola | nucleus | 23.23 | 18.9 |
| CDY57876 | Canola | nucleus | 22.9 | 18.84 |
| Zm00001d006463_P001 | Maize | plastid | 21.89 | 18.52 |
| CDY55549 | Canola | nucleus | 24.24 | 17.91 |
| CDY55422 | Canola | nucleus | 23.91 | 17.71 |
| CDY71684 | Canola | nucleus | 19.87 | 17.61 |
| CDX92613 | Canola | nucleus | 20.2 | 17.49 |
| CDY71763 | Canola | nucleus | 20.2 | 17.49 |
| CDY04855 | Canola | nucleus | 23.91 | 17.49 |
| CDX80822 | Canola | nucleus | 23.91 | 17.49 |
| CDX87270 | Canola | nucleus | 19.87 | 17.3 |
| CDY16754 | Canola | nucleus | 19.53 | 17.06 |
| CDY03494 | Canola | nucleus | 19.53 | 16.86 |
| CDY00341 | Canola | nucleus | 20.54 | 16.58 |
| CDX84369 | Canola | nucleus | 20.54 | 16.44 |
| CDY35454 | Canola | nucleus | 18.52 | 16.08 |
| CDY24798 | Canola | nucleus | 19.19 | 12.58 |
| CDY08776 | Canola | nucleus | 3.03 | 10.47 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078JYP5 | UniProt:A0A078JYP5 | EnsemblPlants:CDY70666 | ProteinID:CDY70666 | ProteinID:CDY70666.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00005133001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF79 | UniParc:UPI0004EDE716 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g53950DBnaA09g53950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYP5]
Coordinates
chrLK042864:+:217..1759
Molecular Weight (calculated)
32315.6 Da
IEP (calculated)
9.227
GRAVY (calculated)
-0.650
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSKNMIVSP SHQQQPPQPQ LKCPRCDSSN TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGSY RKNKRVKRPA TTTAASTAST TTSSSPNNPH
101: HQISHFPSMN HHPLFYGLSD HVSSCNSLPM FPSRFSDPPK TSSGLEGEFP SSGFNGLGLG LPHHMSHDQT INGSFINSST TNKPFLPSSL FGSSVSSSSS
201: TLLQHAHKPM NNNGEMMGQS HLQTLASLQD LHVGGNNEDV NKEGKLVEIS GDMNGFMSSS SLDPSNYHNI WNNASVSSGA WLDPTNNIVG SSLTSLI
101: HQISHFPSMN HHPLFYGLSD HVSSCNSLPM FPSRFSDPPK TSSGLEGEFP SSGFNGLGLG LPHHMSHDQT INGSFINSST TNKPFLPSSL FGSSVSSSSS
201: TLLQHAHKPM NNNGEMMGQS HLQTLASLQD LHVGGNNEDV NKEGKLVEIS GDMNGFMSSS SLDPSNYHNI WNNASVSSGA WLDPTNNIVG SSLTSLI
001: MQSKNMIVAS SHQQQQQQQP QQPQPQLKCP RCDSSNTKFC YYNNYSLSQP RHFCKACKRY WTRGGTLRNV PVGGSYRKNK RVKRPSTATT TTASTVSTTN
101: SSSPNNPHQI SHFSSMNHHP LFYGLSDHMS SCNNNLPMIP SRFSDSSKTC SSSGLESEFL SSGFSSLSAL GLGLPHQMSH DHTINGSFIN NSTTNKPFLL
201: SGLFGSSMSS SSTLLQHPHK PMNNGGDMLG QSHLQTLASL QDLHVGGNNE DMKYKEGKLD QISGNINGFM SSSSSLDPSN YNNMWNNASV VNGAWLDPTN
301: NNVGSSLTSL I
101: SSSPNNPHQI SHFSSMNHHP LFYGLSDHMS SCNNNLPMIP SRFSDSSKTC SSSGLESEFL SSGFSSLSAL GLGLPHQMSH DHTINGSFIN NSTTNKPFLL
201: SGLFGSSMSS SSTLLQHPHK PMNNGGDMLG QSHLQTLASL QDLHVGGNNE DMKYKEGKLD QISGNINGFM SSSSSLDPSN YNNMWNNASV VNGAWLDPTN
301: NNVGSSLTSL I
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G28310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.