CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 3
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021591_P001	Maize	nucleus	93.22	91.67
Zm00001d006463_P001	Maize	plastid	80.51	81.2
TraesCS2A01G225900.1	Wheat	nucleus, plastid	72.03	71.63
TraesCS2D01G231600.1	Wheat	nucleus	70.62	70.22
TraesCS2B01G249200.1	Wheat	nucleus, plastid	70.06	69.86
EER91281	Sorghum	nucleus	33.62	30.91
OQU79380	Sorghum	nucleus, vacuole	28.25	29.41
VIT_10s0003g00040.t01	Wine grape	nucleus	22.88	26.3
CDY72049	Canola	nucleus	20.62	24.58
CDY70666	Canola	nucleus	20.34	24.24
Bra032891.1-P	Field mustard	nucleus	20.06	23.91
Bra030089.1-P	Field mustard	nucleus	20.06	23.83
Bra010884.1-P	Field mustard	nucleus	19.49	23.39
KXG39680	Sorghum	nucleus	25.99	23.35
KXG30845	Sorghum	nucleus	19.49	22.7
GSMUA_Achr9P25010_001	Banana	nucleus	19.49	22.55
AT1G28310.2	Thale cress	nucleus	20.9	22.09
CDY35729	Canola	nucleus	18.64	22.07
CDY66590	Canola	nucleus	20.34	22.02
KXG37254	Sorghum	nucleus	26.84	21.84
CDY15678	Canola	nucleus	20.06	21.71
EES05649	Sorghum	nucleus	18.08	21.69
KRH10907	Soybean	nucleus	21.47	21.53
CDX90142	Canola	nucleus	19.21	21.52
KXG21095	Sorghum	nucleus	22.6	20.78
KRH21402	Soybean	nucleus	20.62	20.45
KRH50083	Soybean	nucleus	20.06	20.4
KRH20416	Soybean	nucleus	20.34	20.4
Solyc02g077950.1.1	Tomato	nucleus	21.47	20.05
EES07840	Sorghum	nucleus	18.93	19.71
PGSC0003DMT400076447	Potato	nucleus	21.75	19.35
EES15496	Sorghum	nucleus	19.21	19.21
EES03938	Sorghum	nucleus	17.8	18.81
KXG26925	Sorghum	nucleus	20.34	18.56
KXG37485	Sorghum	nucleus	18.08	16.84
KXG31020	Sorghum	nucleus	20.62	15.97
EES18302	Sorghum	plastid	15.54	15.03

Protein Annotations

MapMan:15.5.1.5	EntrezGene:8077488	ProteinID:AGL40013.1	UniProt:C5X9D9	ProteinID:DAA34009.1	EnsemblPlants:EER97271
ProteinID:EER97271	ProteinID:EER97271.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	PFAM:PD007478
PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF63	EnsemblPlantsGene:SORBI_3002G313800
UniParc:UPI0001A834DF	RefSeq:XP_002460750.1	InterPro:Znf_Dof	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:68753630..68759387

Molecular Weight (calculated)

34830.6 Da

IEP (calculated)

8.057

GRAVY (calculated)

-0.048

Length

354 amino acids

Sequence
(BLAST)

001: MAGAGGATAV QQPAAGAPAA AGGAARSGVG AGAAGAPVAD PRAEALRCPR CDSANTKFCY YNNYSLSQPR HFCKACKRYW TRGGTLRNVP VGGGCRKNKR
101: SRSSGGAGGR NGSSSSASAA AAAVTSSSAA STLSLPPPTG SLPSLTSALG LPGGASLASL LLGTAGSGGD HLGLFQAAMQ SVVSSEATAY EMQQQQSQVD
201: HLLGLGYGGA TGAGAQIHLK PWMQEAAGAG GIMDSFYAPL LSSSLVPGLE ELHVKAEVAG AGDHQQKPAP GDQQSASWEL PTPSSSNVDA NVIASDALMA
301: AAAASMNPAV SSSTSTAPTT VPSSFMYWGN GGIGGAAAAW PDLANCGSSI ATLF

Best Arabidopsis Sequence Match ( AT5G60200.1 )
(BLAST)

001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM

Arabidopsis Description

DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.