CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
plastid 1
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030727_P002	Maize	nucleus	95.29	95.01
Os12t0569900-01	Rice	nucleus	76.76	75.0
HORVU5Hr1G021290.1	Barley	nucleus	74.12	73.04
TraesCS5A01G078100.1	Wheat	nucleus	72.94	72.51
TraesCS5D01G093800.2	Wheat	nucleus	72.94	71.88
TraesCS5B01G087600.3	Wheat	nucleus	72.65	71.8
PGSC0003DMT400078164	Potato	nucleus	32.94	35.0
GSMUA_Achr10P...	Banana	nucleus	34.41	34.72
Solyc06g076030.2.1	Tomato	nucleus	32.35	32.93
KRG99864	Soybean	nucleus	34.41	32.23
KRH46814	Soybean	nucleus	34.71	32.15
KXG37254	Sorghum	nucleus	38.82	30.34
KXG39680	Sorghum	nucleus	34.41	29.7
KXG21095	Sorghum	nucleus	32.06	28.31
KRH70477	Soybean	nucleus	30.88	28.3
EER97271	Sorghum	nucleus	29.41	28.25
EER91281	Sorghum	nucleus	28.24	24.94
EES05649	Sorghum	nucleus	20.88	24.07
KXG30845	Sorghum	nucleus	20.29	22.7
KXG26925	Sorghum	nucleus	25.59	22.42
EES07840	Sorghum	nucleus	19.71	19.71
EES03938	Sorghum	nucleus	19.41	19.7
EES18302	Sorghum	plastid	20.88	19.4
KXG31020	Sorghum	nucleus	24.71	18.38
EES15496	Sorghum	nucleus	19.12	18.36
KXG37485	Sorghum	nucleus	20.0	17.89

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A1Z5R6M5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	EnsemblPlants:OQU79380
ProteinID:OQU79380	ProteinID:OQU79380.1	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF75	EnsemblPlantsGene:SORBI_3008G136100	UniParc:UPI000B425246	InterPro:Znf_Dof	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:56483148..56485117

Molecular Weight (calculated)

34559.6 Da

IEP (calculated)

8.876

GRAVY (calculated)

-0.234

Length

340 amino acids

Sequence
(BLAST)

001: MVFSSLPIFL DPPSWGQMQM QQQPPLQCLL GGGGGGSDHH HLMPPPSGLA PLPGGPADTA ASAPAGGGSS TSMQAAAGAG TAAAQPRPVV SMAERARLAR
101: VPLPEPGTLR CPRCDSTNTK FCYFNNYSLS QPRHFCKACR RYWTRGGALR NVPVGGGCRR NTKRSSKKSS RGGGGAGATA ATSSSSTTST STTATTTTAT
201: TTSAAMAAAE AIASMQAQLP HLGLPPAAAA AALEASLEGY HHYLPLQMQP QFLQQAGLHG YHFADDGTGV LADGFPRGVV ASGLLAQLAA VKMEEHSSNG
301: GGAVAAHHEQ SYWPGSTGGG SGWPAEFLSG FSSSSSGNVL

Best Arabidopsis Sequence Match ( AT2G28810.1 )
(BLAST)

001: MVFSSVSSFL DPPINWPQSA NPNNHPHHHQ LQENGSLVSG HHQVLSHHFP QNPNPNHHHV ETAAATTVDP SSLNGQAAER ARLAKNSQPP EGALKCPRCD
101: SANTKFCYFN NYNLTQPRHF CKACRRYWTR GGALRNVPVG GGCRRNKKGK SGNSKSSSSS QNKQSTSMVN ATSPTNTSNV QLQTNSQFPF LPTLQNLTQL
201: GGIGLNLAAI NGNNGGNGNT SSSFLNDLGF FHGGNTSGPV MGNNNENNLM TSLGSSSHFA LFDRTMGLYN FPNEVNMGLS SIGATRVSQT AQVKMEDNHL
301: GNISRPVSGL TSPGNQSNQY WTGQGLPGSS SNDHHHQHLM

Arabidopsis Description

DOF2.2Dof zinc finger protein DOF2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.