Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042736_P001 | Maize | nucleus | 89.25 | 92.0 |
| Os01t0865800-00 | Rice | nucleus | 82.39 | 83.89 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 76.12 | 77.04 |
| TraesCS3A01G377000.1 | Wheat | nucleus | 76.12 | 77.04 |
| Zm00001d012280_P001 | Maize | nucleus | 77.61 | 76.92 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 75.82 | 76.74 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 75.52 | 76.44 |
| EES18302 | Sorghum | plastid | 51.04 | 46.72 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 22.39 | 30.0 |
| Bra017906.1-P | Field mustard | nucleus | 20.0 | 26.48 |
| CDY04620 | Canola | nucleus | 20.0 | 26.38 |
| CDY50231 | Canola | nucleus | 19.7 | 26.09 |
| CDY00373 | Canola | nucleus | 20.0 | 25.77 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 21.49 | 25.62 |
| Bra012277.1-P | Field mustard | nucleus | 19.7 | 25.29 |
| CDY61064 | Canola | nucleus | 19.7 | 25.29 |
| AT1G21340.1 | Thale cress | nucleus | 19.1 | 24.62 |
| PGSC0003DMT400002060 | Potato | nucleus | 19.1 | 24.06 |
| Solyc04g070960.1.1 | Tomato | nucleus | 19.1 | 23.97 |
| KRH53419 | Soybean | nucleus | 20.6 | 23.88 |
| KRH64521 | Soybean | nucleus | 20.3 | 23.53 |
| EES05649 | Sorghum | nucleus | 18.81 | 21.36 |
| KXG30845 | Sorghum | nucleus | 18.81 | 20.72 |
| KXG26925 | Sorghum | nucleus | 23.88 | 20.62 |
| EES07840 | Sorghum | nucleus | 20.3 | 20.0 |
| OQU79380 | Sorghum | nucleus, vacuole | 19.7 | 19.41 |
| EES15496 | Sorghum | nucleus | 20.0 | 18.93 |
| KXG21095 | Sorghum | nucleus | 20.9 | 18.18 |
| EER97271 | Sorghum | nucleus | 18.81 | 17.8 |
| KXG37485 | Sorghum | nucleus | 20.0 | 17.63 |
| EER91281 | Sorghum | nucleus | 20.0 | 17.4 |
| KXG31020 | Sorghum | nucleus | 23.28 | 17.07 |
| KXG39680 | Sorghum | nucleus | 19.7 | 16.75 |
| KXG37254 | Sorghum | nucleus | 21.49 | 16.55 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:8060971 | UniProt:C5XQM2 | ProteinID:DAA34014.1 | EnsemblPlants:EES03938 | ProteinID:EES03938 |
| ProteinID:EES03938.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF39 | EnsemblPlantsGene:SORBI_3003G367100 | UniParc:UPI0001A85276 |
| RefSeq:XP_002458818.1 | InterPro:Znf_Dof | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:68335907..68337567
Molecular Weight (calculated)
35260.0 Da
IEP (calculated)
4.544
GRAVY (calculated)
-0.298
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSHHEAML PYAPGPPPSL LVDRRYKQGG EAAPNCPRCD SPNTKFCYYN NYSLSQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKNRRGK SSLRSAADAA
101: IASGGGRDAA FGHHRFPGPV RPDLVLEGMV GNPSNPAGQA MPGGVPAATD GSTIDLAMLY AKFLNHPPAE EGVNAVTPES AGQVVDEAFD TFSASSDLSP
201: GVLAPLQFDP CHDGFGEWSA GGPVSSTGPS STASTTAATT MLCADVSVQA AFGELNFAMD QSCFDSLGLP TDDVVGNLSS SWCSIVPGLS TLEDTKYDSL
301: DSFPDDALSL HEDMISGTDH DWSVDCQGLE ALYMP
101: IASGGGRDAA FGHHRFPGPV RPDLVLEGMV GNPSNPAGQA MPGGVPAATD GSTIDLAMLY AKFLNHPPAE EGVNAVTPES AGQVVDEAFD TFSASSDLSP
201: GVLAPLQFDP CHDGFGEWSA GGPVSSTGPS STASTTAATT MLCADVSVQA AFGELNFAMD QSCFDSLGLP TDDVVGNLSS SWCSIVPGLS TLEDTKYDSL
301: DSFPDDALSL HEDMISGTDH DWSVDCQGLE ALYMP
001: MHAYIIHSYS DRLKKSERDM ERAEALTSSF IWRPNANANA EITPSCPRCG SSNTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKSRRPK
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.