Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G377000.1 | Wheat | nucleus | 97.58 | 97.58 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 96.37 | 96.37 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 96.07 | 96.07 |
| Os01t0865800-00 | Rice | nucleus | 78.85 | 79.33 |
| EES03938 | Sorghum | nucleus | 76.44 | 75.52 |
| Zm00001d042736_P001 | Maize | nucleus | 72.81 | 74.15 |
| Zm00001d012280_P001 | Maize | nucleus | 67.67 | 66.27 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 52.57 | 46.15 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 22.05 | 29.2 |
| Bra017906.1-P | Field mustard | nucleus | 20.24 | 26.48 |
| CDY04620 | Canola | nucleus | 20.24 | 26.38 |
| CDY50231 | Canola | nucleus | 19.94 | 26.09 |
| CDY00373 | Canola | nucleus | 19.64 | 25.0 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 21.15 | 24.91 |
| Bra012277.1-P | Field mustard | nucleus | 19.34 | 24.52 |
| CDY61064 | Canola | nucleus | 19.34 | 24.52 |
| AT1G21340.1 | Thale cress | nucleus | 19.03 | 24.23 |
| PGSC0003DMT400002060 | Potato | nucleus | 19.34 | 24.06 |
| Solyc04g070960.1.1 | Tomato | nucleus | 19.34 | 23.97 |
| KRH64521 | Soybean | nucleus | 20.24 | 23.18 |
| KRH53419 | Soybean | nucleus | 20.24 | 23.18 |
| TraesCS7D01G215300.1 | Wheat | nucleus | 19.34 | 22.54 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 19.64 | 22.41 |
| TraesCS6D01G254200.1 | Wheat | nucleus | 20.24 | 21.9 |
| TraesCS2D01G399500.1 | Wheat | nucleus | 23.57 | 20.63 |
| TraesCS6D01G236700.1 | Wheat | nucleus | 24.17 | 20.46 |
| TraesCS5D01G093800.2 | Wheat | nucleus | 19.34 | 18.55 |
| TraesCS1D01G036700.2 | Wheat | nucleus | 20.24 | 18.31 |
| TraesCS2D01G076600.1 | Wheat | nucleus | 18.13 | 18.29 |
| TraesCS4D01G207600.1 | Wheat | nucleus | 20.85 | 18.11 |
| TraesCS5D01G412000.1 | Wheat | nucleus | 19.94 | 17.37 |
| TraesCS5D01G161000.1 | Wheat | nucleus | 17.82 | 17.25 |
| TraesCS3D01G537500.1 | Wheat | nucleus | 19.64 | 17.02 |
| TraesCS2D01G231600.1 | Wheat | nucleus | 17.82 | 16.57 |
| TraesCS3D01G537400.1 | Wheat | nucleus | 17.82 | 15.69 |
| TraesCS5D01G493000.1 | Wheat | nucleus | 21.15 | 15.38 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G370100.1 | EnsemblPlantsGene:TraesCS3D01G370100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF39 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr3D:-:483176431..483177426
Molecular Weight (calculated)
35229.8 Da
IEP (calculated)
4.469
GRAVY (calculated)
-0.393
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSHPHEAA MLPYVPRPPS LLVDRRYSTG AEVAPNCPRC DSPNTKFCYY NNYSLSQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKNRRG KSSVRSASDS
101: FSGVRDATFG HGGFPGPLRP DMVLEGMVGN PANPGQGMHD VPTAPDGSSI DLAMLYSKFL NNQQPAGDGN LVGSVTPESA GGHVDETFDT FSASSDMSPS
201: GLLPPAQFDA SPDGFVDWSR PVSSADPTST ASPATATTML CTDESVQAAL GELNFAMDQS CFDSLGLPTD GAAANLSSWC SIVPSLSTWE EPKYDSLDSF
301: PDDTLSLHDG ILAADHDWSA DCQGLEALYM P
101: FSGVRDATFG HGGFPGPLRP DMVLEGMVGN PANPGQGMHD VPTAPDGSSI DLAMLYSKFL NNQQPAGDGN LVGSVTPESA GGHVDETFDT FSASSDMSPS
201: GLLPPAQFDA SPDGFVDWSR PVSSADPTST ASPATATTML CTDESVQAAL GELNFAMDQS CFDSLGLPTD GAAANLSSWC SIVPSLSTWE EPKYDSLDSF
301: PDDTLSLHDG ILAADHDWSA DCQGLEALYM P
001: MHAYIIHSYS DRLKKSERDM ERAEALTSSF IWRPNANANA EITPSCPRCG SSNTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKSRRPK
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.