Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012277.1-P | Field mustard | nucleus | 98.85 | 98.85 |
| CDY00373 | Canola | nucleus | 93.1 | 93.46 |
| CDY50231 | Canola | nucleus | 78.54 | 81.03 |
| AT1G21340.1 | Thale cress | nucleus | 79.69 | 80.0 |
| CDY04620 | Canola | nucleus | 77.39 | 79.53 |
| CDY70840 | Canola | nucleus | 19.16 | 44.25 |
| CDY29082 | Canola | nucleus | 28.35 | 30.83 |
| KRH53419 | Soybean | nucleus | 34.1 | 30.8 |
| CDX90602 | Canola | nucleus | 28.35 | 30.71 |
| CDX78095 | Canola | nucleus | 28.35 | 30.58 |
| Solyc04g070960.1.1 | Tomato | nucleus | 31.03 | 30.34 |
| KRH64521 | Soybean | nucleus | 33.33 | 30.1 |
| PGSC0003DMT400002060 | Potato | nucleus | 30.65 | 30.08 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 32.18 | 29.89 |
| CDY59600 | Canola | nucleus | 27.59 | 29.51 |
| CDY53379 | Canola | nucleus | 24.52 | 29.22 |
| CDX77184 | Canola | nucleus | 25.29 | 25.78 |
| CDY08775 | Canola | nucleus | 18.39 | 24.49 |
| CDX80191 | Canola | nucleus | 22.99 | 23.35 |
| CDY09221 | Canola | nucleus | 22.99 | 23.26 |
| CDY31568 | Canola | nucleus | 22.99 | 23.26 |
| CDX71050 | Canola | nucleus | 22.22 | 22.92 |
| CDX87189 | Canola | nucleus | 21.07 | 22.0 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 21.07 | 22.0 |
| CDX88742 | Canola | nucleus | 22.99 | 21.66 |
| CDY07781 | Canola | nucleus | 17.62 | 21.5 |
| CDY72657 | Canola | nucleus | 23.75 | 21.23 |
| CDY02191 | Canola | nucleus | 23.75 | 21.09 |
| CDY16836 | Canola | nucleus | 21.07 | 20.6 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 24.14 | 19.94 |
| CDY42836 | Canola | nucleus | 21.84 | 19.93 |
| CDY40813 | Canola | nucleus | 21.46 | 19.79 |
| EES03938 | Sorghum | nucleus | 25.29 | 19.7 |
| Zm00001d042736_P001 | Maize | nucleus | 24.52 | 19.69 |
| TraesCS1A01G275000.1 | Wheat | nucleus | 23.75 | 19.62 |
| CDY08392 | Canola | nucleus | 25.29 | 19.53 |
| Os01t0865800-00 | Rice | nucleus | 24.52 | 19.45 |
| CDY51722 | Canola | nucleus | 20.69 | 19.42 |
| CDY07156 | Canola | nucleus | 20.69 | 19.35 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 24.52 | 19.34 |
| TraesCS3A01G377000.1 | Wheat | nucleus | 24.52 | 19.34 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 24.52 | 19.34 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 24.52 | 19.34 |
| Os05t0440000-00 | Rice | nucleus | 24.14 | 19.27 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 24.14 | 19.27 |
| CDY03494 | Canola | nucleus | 25.29 | 19.19 |
| CDY35454 | Canola | nucleus | 24.9 | 19.01 |
| CDY33948 | Canola | nucleus | 21.84 | 18.87 |
| CDY71684 | Canola | nucleus | 24.14 | 18.81 |
| CDX92613 | Canola | nucleus | 24.52 | 18.66 |
| CDY71763 | Canola | nucleus | 24.52 | 18.66 |
| CDX86775 | Canola | nucleus | 22.22 | 18.65 |
| CDY37834 | Canola | nucleus | 21.46 | 18.42 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 24.14 | 18.31 |
| CDY70312 | Canola | nucleus | 19.92 | 18.31 |
| CDX79743 | Canola | nucleus | 20.31 | 18.09 |
| CDY70838 | Canola | nucleus | 21.07 | 17.97 |
| CDY64622 | Canola | nucleus | 22.22 | 17.96 |
| CDY16754 | Canola | nucleus | 23.37 | 17.94 |
| CDX87270 | Canola | nucleus | 23.37 | 17.89 |
| CDX81292 | Canola | nucleus | 19.16 | 17.73 |
| CDX71704 | Canola | nucleus | 22.61 | 17.61 |
| CDY72049 | Canola | nucleus | 19.92 | 17.51 |
| EES18302 | Sorghum | plastid | 24.52 | 17.49 |
| Zm00001d012280_P001 | Maize | nucleus | 22.61 | 17.46 |
| CDY35729 | Canola | nucleus | 19.92 | 17.39 |
| CDX89134 | Canola | extracellular, vacuole | 22.99 | 17.24 |
| CDY70666 | Canola | nucleus | 19.54 | 17.17 |
| CDX93365 | Canola | nucleus | 20.31 | 17.15 |
| CDY65260 | Canola | nucleus | 20.31 | 17.15 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 24.52 | 16.98 |
| CDY41539 | Canola | nucleus | 23.75 | 16.94 |
| CDX74947 | Canola | nucleus | 21.07 | 16.92 |
| CDX73385 | Canola | nucleus | 19.54 | 16.89 |
| CDX90142 | Canola | nucleus | 20.31 | 16.77 |
| CDX80030 | Canola | nucleus | 23.37 | 16.76 |
| CDY57876 | Canola | nucleus | 22.99 | 16.62 |
| CDX91370 | Canola | nucleus | 20.69 | 16.62 |
| CDY69145 | Canola | nucleus, plastid | 19.92 | 16.51 |
| CDY27314 | Canola | nucleus | 22.61 | 16.39 |
| CDY00341 | Canola | nucleus | 22.99 | 16.3 |
| CDX95706 | Canola | nucleus | 22.99 | 16.26 |
| CDX84369 | Canola | nucleus | 22.99 | 16.17 |
| CDX83357 | Canola | nucleus | 22.99 | 16.04 |
| CDY61727 | Canola | nucleus | 22.99 | 16.04 |
| CDY40358 | Canola | nucleus | 20.31 | 15.92 |
| CDY15678 | Canola | nucleus | 19.54 | 15.6 |
| CDY66590 | Canola | nucleus | 19.54 | 15.6 |
| CDY15624 | Canola | nucleus | 19.16 | 14.97 |
| CDY70704 | Canola | nucleus | 20.69 | 14.79 |
| CDX95139 | Canola | nucleus | 18.77 | 14.58 |
| CDY24798 | Canola | nucleus | 24.9 | 14.35 |
| CDX76102 | Canola | nucleus | 20.69 | 14.17 |
| CDY31735 | Canola | nucleus | 18.39 | 13.95 |
| CDY55549 | Canola | nucleus | 21.46 | 13.93 |
| CDX77212 | Canola | nucleus | 18.01 | 13.82 |
| CDY40213 | Canola | nucleus | 18.77 | 13.8 |
| CDX80822 | Canola | nucleus | 21.46 | 13.79 |
| CDY55422 | Canola | nucleus | 21.07 | 13.72 |
| CDY04855 | Canola | nucleus | 20.69 | 13.3 |
| CDY61965 | Canola | nucleus | 15.33 | 12.86 |
| CDY06274 | Canola | nucleus | 15.33 | 12.74 |
| CDY08776 | Canola | nucleus | 1.53 | 4.65 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078J8B7 | UniProt:A0A078J8B7 | EnsemblPlants:CDY61064 | ProteinID:CDY61064 | ProteinID:CDY61064.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00030503001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF73 | UniParc:UPI0004EEE596 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g37300DBnaA07g37300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8B7]
Coordinates
chrLK033951:-:26159..26944
Molecular Weight (calculated)
29216.7 Da
IEP (calculated)
4.850
GRAVY (calculated)
-0.659
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFPYTAHNV CQRQFPSPEI EIPAKWKISY GHEETAPPCP RCASSNTKFC YYNNYSLSQP RYFCKGCRRY WTKGGSLRNI PVGGGCRKRS RSRRQSIHKR
101: FGPNENLPDG LISGSQSSPA GSDIDLAAVF AQYVNAPSPS STDNTTGSDQ DSPVTTTTTT TNTHALNSLS WDICQETDVN LGFYGEFNDL TNKIQEDERG
201: VGHFLQEDQE EIFEFQGLLD DKDIQEILEC SFSEVPEQLI SQGSFMINGH WSSTDLTTFG V
101: FGPNENLPDG LISGSQSSPA GSDIDLAAVF AQYVNAPSPS STDNTTGSDQ DSPVTTTTTT TNTHALNSLS WDICQETDVN LGFYGEFNDL TNKIQEDERG
201: VGHFLQEDQE EIFEFQGLLD DKDIQEILEC SFSEVPEQLI SQGSFMINGH WSSTDLTTFG V
001: MLPYIGHNSY QQHQFPLPEM EIPEKWKLSY EQEAITAPAC PRCASSNTKF CYYNNYSLSQ PRYFCKGCRR YWTKGGSLRN IPVGGGCRKR SRSRQNSHKR
101: FGRNENRPDG LINQDDGFQS SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG SDQDSPITTT THALESLSWD ICQETDVDLG FYGEFNNLTQ KTKEDQEVFG
201: QFLQEDREEI FEFQGLLDDK EIQEILECSF SEEPDQLVSQ GSFMINGDNW SSTDLTRFGI
101: FGRNENRPDG LINQDDGFQS SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG SDQDSPITTT THALESLSWD ICQETDVDLG FYGEFNNLTQ KTKEDQEVFG
201: QFLQEDREEI FEFQGLLDDK EIQEILECSF SEEPDQLVSQ GSFMINGDNW SSTDLTRFGI
Arabidopsis Description
DOF1.2Dof zinc finger protein DOF1.2 [Source:UniProtKB/Swiss-Prot;Acc:P68349]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.