Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017906.1-P | Field mustard | nucleus | 96.44 | 96.44 |
| CDY04620 | Canola | nucleus | 95.65 | 95.28 |
| AT1G21340.1 | Thale cress | nucleus | 83.79 | 81.54 |
| CDY00373 | Canola | nucleus | 81.82 | 79.62 |
| CDY61064 | Canola | nucleus | 81.03 | 78.54 |
| CDY70840 | Canola | nucleus | 19.76 | 44.25 |
| KRH53419 | Soybean | nucleus | 34.39 | 30.1 |
| Solyc04g070960.1.1 | Tomato | nucleus | 31.23 | 29.59 |
| PGSC0003DMT400002060 | Potato | nucleus | 30.83 | 29.32 |
| CDY53379 | Canola | nucleus | 25.3 | 29.22 |
| CDX78095 | Canola | nucleus | 27.67 | 28.93 |
| CDY29082 | Canola | nucleus | 27.27 | 28.75 |
| KRH64521 | Soybean | nucleus | 32.81 | 28.72 |
| CDX90602 | Canola | nucleus | 27.27 | 28.63 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 31.23 | 28.11 |
| CDY59600 | Canola | nucleus | 26.88 | 27.87 |
| CDX77184 | Canola | nucleus | 26.09 | 25.78 |
| CDX80191 | Canola | nucleus | 24.51 | 24.12 |
| CDY09221 | Canola | nucleus | 24.51 | 24.03 |
| CDY31568 | Canola | nucleus | 24.51 | 24.03 |
| CDY08775 | Canola | nucleus | 18.58 | 23.98 |
| CDX71050 | Canola | nucleus | 23.72 | 23.72 |
| CDY07781 | Canola | nucleus | 18.97 | 22.43 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 22.13 | 22.4 |
| CDY72657 | Canola | nucleus | 25.69 | 22.26 |
| CDX88742 | Canola | nucleus | 24.11 | 22.02 |
| CDX87189 | Canola | nucleus | 21.34 | 21.6 |
| CDY02191 | Canola | nucleus | 24.51 | 21.09 |
| CDY16836 | Canola | nucleus | 21.74 | 20.6 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 25.3 | 20.25 |
| CDY51722 | Canola | nucleus | 22.13 | 20.14 |
| CDY07156 | Canola | nucleus | 22.13 | 20.07 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 26.09 | 19.94 |
| TraesCS3A01G377000.1 | Wheat | nucleus | 26.09 | 19.94 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 26.09 | 19.94 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 26.09 | 19.94 |
| TraesCS1A01G275000.1 | Wheat | nucleus | 24.9 | 19.94 |
| CDY42836 | Canola | nucleus | 22.53 | 19.93 |
| CDY08392 | Canola | nucleus | 26.48 | 19.82 |
| CDY40813 | Canola | nucleus | 22.13 | 19.79 |
| CDY03494 | Canola | nucleus | 26.88 | 19.77 |
| EES03938 | Sorghum | nucleus | 26.09 | 19.7 |
| Zm00001d042736_P001 | Maize | nucleus | 25.3 | 19.69 |
| Os05t0440000-00 | Rice | nucleus | 25.3 | 19.57 |
| Os01t0865800-00 | Rice | nucleus | 25.3 | 19.45 |
| CDY71684 | Canola | nucleus | 25.69 | 19.4 |
| CDY35454 | Canola | nucleus | 26.09 | 19.3 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 24.9 | 19.27 |
| CDX92613 | Canola | nucleus | 26.09 | 19.24 |
| CDY71763 | Canola | nucleus | 26.09 | 19.24 |
| CDX79743 | Canola | nucleus | 21.74 | 18.77 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 25.3 | 18.6 |
| CDX86775 | Canola | nucleus | 22.53 | 18.33 |
| CDY33948 | Canola | nucleus | 21.74 | 18.21 |
| CDX93365 | Canola | nucleus | 22.13 | 18.12 |
| CDY65260 | Canola | nucleus | 22.13 | 18.12 |
| Zm00001d012280_P001 | Maize | nucleus | 24.11 | 18.05 |
| CDY37834 | Canola | nucleus | 21.34 | 17.76 |
| EES18302 | Sorghum | plastid | 25.69 | 17.76 |
| CDY64622 | Canola | nucleus | 22.53 | 17.65 |
| CDY70838 | Canola | nucleus | 21.34 | 17.65 |
| CDX71704 | Canola | nucleus | 23.32 | 17.61 |
| CDY70312 | Canola | nucleus | 19.76 | 17.61 |
| CDX74947 | Canola | nucleus | 22.53 | 17.54 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 26.09 | 17.51 |
| CDY16754 | Canola | nucleus | 23.32 | 17.35 |
| CDX87270 | Canola | nucleus | 23.32 | 17.3 |
| CDX91370 | Canola | nucleus | 22.13 | 17.23 |
| CDX73385 | Canola | nucleus | 20.55 | 17.22 |
| CDY70666 | Canola | nucleus | 20.16 | 17.17 |
| CDY72049 | Canola | nucleus | 20.16 | 17.17 |
| CDY35729 | Canola | nucleus | 20.16 | 17.06 |
| CDX81292 | Canola | nucleus | 18.97 | 17.02 |
| CDX89134 | Canola | extracellular, vacuole | 23.32 | 16.95 |
| CDY41539 | Canola | nucleus | 24.11 | 16.67 |
| CDX80030 | Canola | nucleus | 23.72 | 16.48 |
| CDX90142 | Canola | nucleus | 20.55 | 16.46 |
| CDY57876 | Canola | nucleus | 23.32 | 16.34 |
| CDX95706 | Canola | nucleus | 23.72 | 16.26 |
| CDY69145 | Canola | nucleus, plastid | 20.16 | 16.19 |
| CDY27314 | Canola | nucleus | 22.92 | 16.11 |
| CDX83357 | Canola | nucleus | 23.72 | 16.04 |
| CDY00341 | Canola | nucleus | 23.32 | 16.03 |
| CDX84369 | Canola | nucleus | 23.32 | 15.9 |
| CDY61727 | Canola | nucleus | 23.32 | 15.78 |
| CDY40358 | Canola | nucleus | 20.16 | 15.32 |
| CDY15678 | Canola | nucleus | 19.76 | 15.29 |
| CDY66590 | Canola | nucleus | 19.76 | 15.29 |
| CDY15624 | Canola | nucleus | 19.76 | 14.97 |
| CDX95139 | Canola | nucleus | 19.76 | 14.88 |
| CDY24798 | Canola | nucleus | 26.09 | 14.57 |
| CDY70704 | Canola | nucleus | 20.55 | 14.25 |
| CDY40213 | Canola | nucleus | 19.76 | 14.08 |
| CDY31735 | Canola | nucleus | 18.97 | 13.95 |
| CDX76102 | Canola | nucleus | 20.95 | 13.91 |
| CDX77212 | Canola | nucleus | 18.58 | 13.82 |
| CDY55422 | Canola | nucleus | 20.95 | 13.22 |
| CDY55549 | Canola | nucleus | 20.95 | 13.18 |
| CDY61965 | Canola | nucleus | 16.21 | 13.18 |
| CDY06274 | Canola | nucleus | 16.21 | 13.06 |
| CDX80822 | Canola | nucleus | 20.95 | 13.05 |
| CDY04855 | Canola | nucleus | 20.55 | 12.81 |
| CDY08776 | Canola | nucleus | 1.58 | 4.65 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078IJR1 | UniProt:A0A078IJR1 | EnsemblPlants:CDY50231 | ProteinID:CDY50231 | ProteinID:CDY50231.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00096208001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF15 | UniParc:UPI0004EE9215 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g15080DBnaA06g15080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJR1]
Coordinates
chrLK032892:+:12491..13252
Molecular Weight (calculated)
28534.6 Da
IEP (calculated)
4.547
GRAVY (calculated)
-0.828
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLPYNAHNS YQHQFPSPEL EIPEKWKVPY GHDETAPPCP RCASSNTKFC YYNNYSLSQP RYFCKGCRRY WTKGGSLRNI PVGGGCRKRS RSRNNSHKRF
101: GRNENLQRDG LINQDEGSQS SHAGSDIDLA AVFAQYVTNG SPSSTDNTTG SDQDSPLTTT TNHALDSLTW DICQETDVNL GFYGTEKIQD GFGQFLQEDE
201: EEMFEFQGLL DDKEIQEILD CAFSEEPDQL ISQGSFMING DHWSSTDLAT FGI
101: GRNENLQRDG LINQDEGSQS SHAGSDIDLA AVFAQYVTNG SPSSTDNTTG SDQDSPLTTT TNHALDSLTW DICQETDVNL GFYGTEKIQD GFGQFLQEDE
201: EEMFEFQGLL DDKEIQEILD CAFSEEPDQL ISQGSFMING DHWSSTDLAT FGI
001: MLPYIGHNSY QQHQFPLPEM EIPEKWKLSY EQEAITAPAC PRCASSNTKF CYYNNYSLSQ PRYFCKGCRR YWTKGGSLRN IPVGGGCRKR SRSRQNSHKR
101: FGRNENRPDG LINQDDGFQS SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG SDQDSPITTT THALESLSWD ICQETDVDLG FYGEFNNLTQ KTKEDQEVFG
201: QFLQEDREEI FEFQGLLDDK EIQEILECSF SEEPDQLVSQ GSFMINGDNW SSTDLTRFGI
101: FGRNENRPDG LINQDDGFQS SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG SDQDSPITTT THALESLSWD ICQETDVDLG FYGEFNNLTQ KTKEDQEVFG
201: QFLQEDREEI FEFQGLLDDK EIQEILECSF SEEPDQLVSQ GSFMINGDNW SSTDLTRFGI
Arabidopsis Description
DOF1.2Dof zinc finger protein DOF1.2 [Source:UniProtKB/Swiss-Prot;Acc:P68349]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.