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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002504.1-P Field mustard nucleus 99.61 99.61
CDX80191 Canola nucleus 96.51 96.89
CDY09221 Canola nucleus 86.05 86.05
CDX71050 Canola nucleus 83.33 84.98
AT5G60200.1 Thale cress nucleus 81.4 81.71
CDX88742 Canola nucleus 82.56 76.9
AT3G45610.1 Thale cress nucleus 63.95 67.35
CDY70840 Canola nucleus 22.48 51.33
CDY53379 Canola nucleus 27.52 32.42
CDY08775 Canola nucleus 20.93 27.55
CDX77184 Canola nucleus 27.13 27.34
CDY07781 Canola nucleus 22.48 27.1
CDY29082 Canola nucleus 23.26 25.0
CDX90602 Canola nucleus 23.26 24.9
CDY51722 Canola nucleus 26.74 24.82
CDY07156 Canola nucleus 26.74 24.73
CDY50231 Canola nucleus 24.03 24.51
CDY04620 Canola nucleus 24.03 24.41
CDX87189 Canola nucleus 23.64 24.4
CDX78095 Canola nucleus 22.48 23.97
CDY00373 Canola nucleus 23.64 23.46
CDY59600 Canola nucleus 22.09 23.36
CDY61064 Canola nucleus 23.26 22.99
CDY16836 Canola nucleus 23.64 22.85
KRH50082 Soybean nucleus 24.81 22.22
CDY35729 Canola nucleus 24.81 21.4
CDY70666 Canola nucleus 24.42 21.21
CDX79743 Canola nucleus 24.03 21.16
CDY02191 Canola nucleus 24.03 21.09
CDY41539 Canola nucleus 29.84 21.04
CDX86775 Canola nucleus 25.19 20.9
CDX71704 Canola nucleus 27.13 20.9
CDX80030 Canola nucleus 29.46 20.88
CDY72049 Canola nucleus 24.03 20.88
CDY40813 Canola nucleus 22.87 20.85
CDX84369 Canola nucleus 29.84 20.75
CDY64622 Canola nucleus 25.97 20.74
CDX93365 Canola nucleus 24.81 20.71
CDY00341 Canola nucleus 29.46 20.65
CDY16754 Canola nucleus 27.13 20.59
CDX87270 Canola nucleus 27.13 20.53
CDY08392 Canola nucleus 26.74 20.41
CDY65260 Canola nucleus 24.42 20.39
CDY42836 Canola nucleus 22.48 20.28
GSMUA_Achr1P17670_001 Banana nucleus 17.05 20.28
CDY70838 Canola nucleus 24.03 20.26
CDX90142 Canola nucleus 24.81 20.25
Zm00001d029512_P001 Maize nucleus 27.52 20.23
CDY72657 Canola nucleus 22.87 20.21
CDY33948 Canola nucleus 23.64 20.2
CDX73385 Canola nucleus 23.64 20.2
CDY37834 Canola nucleus 23.64 20.07
CDY71684 Canola nucleus 25.97 20.0
CDY69145 Canola nucleus, plastid 24.42 20.0
CDX91370 Canola nucleus 25.19 20.0
CDX74947 Canola nucleus 25.19 20.0
CDX95706 Canola nucleus 28.29 19.78
VIT_00s0652g00010.t01 Wine grape nucleus 22.48 19.66
CDX92613 Canola nucleus 25.97 19.53
CDY71763 Canola nucleus 25.97 19.53
CDY40358 Canola nucleus 25.19 19.52
CDX83357 Canola nucleus 28.29 19.52
CDY03494 Canola nucleus 25.97 19.48
CDY57876 Canola nucleus 27.13 19.39
CDY70312 Canola nucleus 21.32 19.37
CDY66590 Canola nucleus 24.42 19.27
CDX89134 Canola extracellular, vacuole 25.97 19.25
KRH20417 Soybean nucleus 24.42 19.21
CDY35454 Canola nucleus 25.19 19.01
CDY61727 Canola nucleus 27.52 18.98
CDY15678 Canola nucleus 24.03 18.96
CDY27314 Canola nucleus 26.36 18.89
CDY15624 Canola nucleus 24.42 18.86
CDY70704 Canola nucleus 25.97 18.36
GSMUA_Achr5P12010_001 Banana nucleus 24.81 18.03
CDX81292 Canola nucleus 19.38 17.73
CDX77212 Canola nucleus 23.26 17.65
Solyc02g078620.1.1 Tomato nucleus 19.38 17.61
CDX95139 Canola nucleus 22.87 17.56
CDY40213 Canola nucleus 24.03 17.46
CDY31735 Canola nucleus 23.26 17.44
CDX76102 Canola nucleus 25.19 17.06
CDY61965 Canola nucleus 20.54 17.04
CDY06274 Canola nucleus 19.77 16.24
CDY55549 Canola nucleus 25.19 16.17
CDX80822 Canola nucleus 25.19 16.01
CDY55422 Canola nucleus 24.81 15.96
CDY04855 Canola nucleus 24.42 15.52
CDY24798 Canola nucleus 24.81 14.13
CDY08776 Canola nucleus 2.71 8.14
Os03t0276300-00 Rice cytosol 1.55 2.88
Protein Annotations
MapMan:15.5.1.5GO:A0A078H425UniProt:A0A078H425EnsemblPlants:CDY31568ProteinID:CDY31568ProteinID:CDY31568.1
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00047889001InterPro:IPR003851PFAM:PD007478PFAM:PF02701
ScanProsite:PS01361PFscan:PS50884PANTHER:PTHR31992PANTHER:PTHR31992:SF78UniParc:UPI0004EF26D8InterPro:Znf_Dof
SEG:seg:::::
Description
BnaA10g13030DBnaA10g13030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H425]
Coordinates
chrLK032274:-:328416..329457
Molecular Weight (calculated)
27912.4 Da
IEP (calculated)
8.784
GRAVY (calculated)
-0.704
Length
258 amino acids
Sequence
(BLAST)
001: MDHLLQHQDV FSNYNKARDA MGVSSSPNPT EVDHNQKKPS PATGAAKPQP PDLALRCPRC DSTNTKFCYY NNYSLSQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSATRSLRT TPEPAFSAAS FGGFGNNEHT DLSLAFALLN KQPQGSSSHL GFPSAFGNSS SHQSDMESVF GTSQKNENAG YAFGNGSSGL
201: DMAMSDPNKV LWGFPWQMNG EGFGMMSMGG GGGGHVDQVD SGRELWTNMN YINSGALM
Best Arabidopsis Sequence Match ( AT5G60200.1 )
(BLAST)
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.