Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78095 | Canola | nucleus | 94.26 | 95.04 |
| Bra006923.1-P | Field mustard | nucleus | 93.44 | 94.21 |
| CDX90602 | Canola | nucleus | 81.15 | 82.16 |
| CDY29082 | Canola | nucleus | 80.33 | 81.67 |
| AT3G52440.2 | Thale cress | nucleus | 85.25 | 78.2 |
| CDY70840 | Canola | nucleus | 20.9 | 45.13 |
| KRG96269 | Soybean | nucleus | 31.56 | 44.77 |
| KRG96256 | Soybean | nucleus | 37.3 | 33.58 |
| VIT_08s0105g00170.t01 | Wine grape | nucleus | 36.48 | 32.96 |
| PGSC0003DMT400055052 | Potato | nucleus | 36.89 | 28.75 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 30.33 | 28.57 |
| CDY00373 | Canola | nucleus | 29.51 | 27.69 |
| CDY61064 | Canola | nucleus | 29.51 | 27.59 |
| CDY53379 | Canola | nucleus | 24.59 | 27.4 |
| CDY50231 | Canola | nucleus | 27.87 | 26.88 |
| CDY04620 | Canola | nucleus | 27.87 | 26.77 |
| CDY07781 | Canola | nucleus | 23.36 | 26.64 |
| CDY08775 | Canola | nucleus | 20.49 | 25.51 |
| CDX77184 | Canola | nucleus | 24.59 | 23.44 |
| CDY07156 | Canola | nucleus | 25.41 | 22.22 |
| CDX80191 | Canola | nucleus | 23.36 | 22.18 |
| CDX71050 | Canola | nucleus | 22.95 | 22.13 |
| CDY31568 | Canola | nucleus | 23.36 | 22.09 |
| CDY09221 | Canola | nucleus | 23.36 | 22.09 |
| CDX87189 | Canola | nucleus | 22.54 | 22.0 |
| CDY51722 | Canola | nucleus | 25.0 | 21.94 |
| CDY16836 | Canola | nucleus | 22.54 | 20.6 |
| CDX86775 | Canola | nucleus | 25.82 | 20.26 |
| CDX88742 | Canola | nucleus | 22.95 | 20.22 |
| CDX79743 | Canola | nucleus | 24.18 | 20.14 |
| CDY64622 | Canola | nucleus | 26.64 | 20.12 |
| CDX71704 | Canola | nucleus | 27.05 | 19.7 |
| CDY72657 | Canola | nucleus | 23.36 | 19.52 |
| CDY65260 | Canola | nucleus | 24.59 | 19.42 |
| CDX93365 | Canola | nucleus | 24.59 | 19.42 |
| CDY02191 | Canola | nucleus | 23.36 | 19.39 |
| CDX74947 | Canola | nucleus | 25.82 | 19.38 |
| CDX91370 | Canola | nucleus | 25.82 | 19.38 |
| CDX89134 | Canola | extracellular, vacuole | 27.05 | 18.97 |
| CDY41539 | Canola | nucleus | 28.28 | 18.85 |
| CDY40813 | Canola | nucleus | 21.72 | 18.73 |
| CDY35454 | Canola | nucleus | 26.23 | 18.71 |
| CDX80030 | Canola | nucleus | 27.87 | 18.68 |
| CDY42836 | Canola | nucleus | 21.72 | 18.53 |
| CDX95706 | Canola | nucleus | 27.87 | 18.43 |
| CDY57876 | Canola | nucleus | 27.05 | 18.28 |
| CDX73385 | Canola | nucleus | 22.54 | 18.21 |
| CDX83357 | Canola | nucleus | 27.87 | 18.18 |
| CDY27314 | Canola | nucleus | 26.64 | 18.06 |
| CDY61727 | Canola | nucleus | 27.46 | 17.91 |
| CDY71684 | Canola | nucleus | 24.59 | 17.91 |
| CDY33948 | Canola | nucleus | 22.13 | 17.88 |
| CDY69145 | Canola | nucleus, plastid | 22.95 | 17.78 |
| CDY70312 | Canola | nucleus | 20.49 | 17.61 |
| CDX92613 | Canola | nucleus | 24.59 | 17.49 |
| CDY71763 | Canola | nucleus | 24.59 | 17.49 |
| CDY08392 | Canola | nucleus | 24.18 | 17.46 |
| CDY03494 | Canola | nucleus | 24.59 | 17.44 |
| CDY37834 | Canola | nucleus | 21.72 | 17.43 |
| CDY70838 | Canola | nucleus | 21.72 | 17.32 |
| CDY72049 | Canola | nucleus | 20.9 | 17.17 |
| CDY40358 | Canola | nucleus | 23.36 | 17.12 |
| CDY35729 | Canola | nucleus | 20.9 | 17.06 |
| CDX81292 | Canola | nucleus | 19.67 | 17.02 |
| CDY70666 | Canola | nucleus | 20.49 | 16.84 |
| CDY15624 | Canola | nucleus | 22.95 | 16.77 |
| CDY70704 | Canola | nucleus | 25.0 | 16.71 |
| CDX90142 | Canola | nucleus | 21.31 | 16.46 |
| CDX95139 | Canola | nucleus | 22.54 | 16.37 |
| CDX77212 | Canola | nucleus | 22.54 | 16.18 |
| CDY16754 | Canola | nucleus | 22.54 | 16.18 |
| CDX87270 | Canola | nucleus | 22.54 | 16.13 |
| CDY40213 | Canola | nucleus | 23.36 | 16.06 |
| CDY31735 | Canola | nucleus | 22.54 | 15.99 |
| CDY55549 | Canola | nucleus | 25.82 | 15.67 |
| CDX80822 | Canola | nucleus | 25.82 | 15.52 |
| CDY61965 | Canola | nucleus | 19.67 | 15.43 |
| CDY66590 | Canola | nucleus | 20.49 | 15.29 |
| CDY15678 | Canola | nucleus | 20.49 | 15.29 |
| CDY06274 | Canola | nucleus | 19.67 | 15.29 |
| CDX76102 | Canola | nucleus | 23.77 | 15.22 |
| CDY55422 | Canola | nucleus | 24.59 | 14.96 |
| CDY00341 | Canola | nucleus | 22.54 | 14.95 |
| CDX84369 | Canola | nucleus | 22.54 | 14.82 |
| CDY04855 | Canola | nucleus | 24.18 | 14.53 |
| CDY24798 | Canola | nucleus | 25.41 | 13.69 |
| CDY08776 | Canola | nucleus | 1.23 | 3.49 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078J204 | UniProt:A0A078J204 | EnsemblPlants:CDY59600 | ProteinID:CDY59600 | ProteinID:CDY59600.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00027470001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF73 | UniParc:UPI0004EDF94B | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng35310DBnaCnng35310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J204]
Coordinates
chrLK033786:-:13623..14508
Molecular Weight (calculated)
26950.1 Da
IEP (calculated)
5.928
GRAVY (calculated)
-0.594
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MERTEALTSS FIWRPNANAE ITLSCPRCGS SNTKFCYYNN YSLTQPRYFC KGCRRYWTKG GSLRNVPVGG GGCRKSRRPK SSSGNTKTGL TANSYNSGGG
101: APNIDLALVY ANFLNPKPDE HKLQENCDTD FLVDEPAGAS MEPLWSMDID HGHHHHHYEH QVERIVEECG YNGLPPFPGE ELMSIDTSGV WSDALLNGHN
201: HVDVGGVTPA QIVQDPVVHF ADESSDSTNL LFGSWSRFDF SVDG
101: APNIDLALVY ANFLNPKPDE HKLQENCDTD FLVDEPAGAS MEPLWSMDID HGHHHHHYEH QVERIVEECG YNGLPPFPGE ELMSIDTSGV WSDALLNGHN
201: HVDVGGVTPA QIVQDPVVHF ADESSDSTNL LFGSWSRFDF SVDG
001: MHAYIIHSYS DRLKKSERDM ERAEALTSSF IWRPNANANA EITPSCPRCG SSNTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKSRRPK
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.