Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006675.1-P | Field mustard | nucleus | 99.64 | 99.64 |
| CDX71050 | Canola | nucleus | 83.39 | 91.3 |
| CDY09221 | Canola | nucleus | 78.7 | 84.5 |
| AT5G60200.1 | Thale cress | nucleus | 76.9 | 82.88 |
| CDY31568 | Canola | nucleus | 76.9 | 82.56 |
| CDX80191 | Canola | nucleus | 75.45 | 81.32 |
| AT3G45610.1 | Thale cress | nucleus | 56.32 | 63.67 |
| CDY70840 | Canola | nucleus | 19.49 | 47.79 |
| CDY53379 | Canola | nucleus | 25.63 | 32.42 |
| CDY08775 | Canola | nucleus | 19.49 | 27.55 |
| CDX77184 | Canola | nucleus | 25.27 | 27.34 |
| CDY07781 | Canola | nucleus | 19.49 | 25.23 |
| CDY29082 | Canola | nucleus | 20.94 | 24.17 |
| CDY50231 | Canola | nucleus | 22.02 | 24.11 |
| CDX90602 | Canola | nucleus | 20.94 | 24.07 |
| CDY04620 | Canola | nucleus | 22.02 | 24.02 |
| CDX87189 | Canola | nucleus | 21.66 | 24.0 |
| CDX78095 | Canola | nucleus | 20.58 | 23.55 |
| CDY00373 | Canola | nucleus | 22.02 | 23.46 |
| CDY51722 | Canola | nucleus | 23.47 | 23.38 |
| CDY07156 | Canola | nucleus | 23.47 | 23.3 |
| CDY61064 | Canola | nucleus | 21.66 | 22.99 |
| CDY59600 | Canola | nucleus | 20.22 | 22.95 |
| CDY16836 | Canola | nucleus | 21.66 | 22.47 |
| KRH50082 | Soybean | nucleus | 23.1 | 22.22 |
| CDY70666 | Canola | nucleus | 22.38 | 20.88 |
| CDY02191 | Canola | nucleus | 22.02 | 20.75 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 16.25 | 20.74 |
| CDY70838 | Canola | nucleus | 22.74 | 20.59 |
| CDX86775 | Canola | nucleus | 23.1 | 20.58 |
| CDY72657 | Canola | nucleus | 21.66 | 20.55 |
| CDY72049 | Canola | nucleus | 22.02 | 20.54 |
| CDX73385 | Canola | nucleus | 22.38 | 20.53 |
| CDY40813 | Canola | nucleus | 20.94 | 20.49 |
| CDY64622 | Canola | nucleus | 23.83 | 20.43 |
| CDY35729 | Canola | nucleus | 22.02 | 20.4 |
| CDY33948 | Canola | nucleus | 22.02 | 20.2 |
| CDY37834 | Canola | nucleus | 22.02 | 20.07 |
| CDX71704 | Canola | nucleus | 24.19 | 20.0 |
| CDY71684 | Canola | nucleus | 24.19 | 20.0 |
| VIT_00s0652g00010.t01 | Wine grape | nucleus | 21.3 | 20.0 |
| CDY42836 | Canola | nucleus | 20.58 | 19.93 |
| KRH20417 | Soybean | nucleus | 23.47 | 19.82 |
| CDY03494 | Canola | nucleus | 24.55 | 19.77 |
| CDY69145 | Canola | nucleus, plastid | 22.38 | 19.68 |
| CDX90142 | Canola | nucleus | 22.38 | 19.62 |
| CDX92613 | Canola | nucleus | 24.19 | 19.53 |
| CDY71763 | Canola | nucleus | 24.19 | 19.53 |
| CDX79743 | Canola | nucleus | 20.58 | 19.45 |
| CDX93365 | Canola | nucleus | 21.66 | 19.42 |
| CDY16754 | Canola | nucleus | 23.83 | 19.41 |
| CDX84369 | Canola | nucleus | 25.99 | 19.41 |
| CDY70312 | Canola | nucleus | 19.86 | 19.37 |
| CDX87270 | Canola | nucleus | 23.83 | 19.35 |
| CDY00341 | Canola | nucleus | 25.63 | 19.29 |
| CDX89134 | Canola | extracellular, vacuole | 24.19 | 19.25 |
| CDY08392 | Canola | nucleus | 23.47 | 19.23 |
| CDY40358 | Canola | nucleus | 23.1 | 19.22 |
| CDY57876 | Canola | nucleus | 24.91 | 19.11 |
| CDY65260 | Canola | nucleus | 21.3 | 19.09 |
| CDY35454 | Canola | nucleus | 23.47 | 19.01 |
| CDX95706 | Canola | nucleus | 25.27 | 18.97 |
| CDX74947 | Canola | nucleus | 22.02 | 18.77 |
| CDX91370 | Canola | nucleus | 22.02 | 18.77 |
| CDX83357 | Canola | nucleus | 25.27 | 18.72 |
| Solyc02g078620.1.1 | Tomato | nucleus | 19.13 | 18.66 |
| CDY41539 | Canola | nucleus | 24.55 | 18.58 |
| Zm00001d029512_P001 | Maize | nucleus | 23.47 | 18.52 |
| CDX80030 | Canola | nucleus | 24.19 | 18.41 |
| CDY66590 | Canola | nucleus | 21.66 | 18.35 |
| CDY15624 | Canola | nucleus | 22.02 | 18.26 |
| CDY70704 | Canola | nucleus | 23.83 | 18.08 |
| CDY15678 | Canola | nucleus | 21.3 | 18.04 |
| CDY61727 | Canola | nucleus | 24.19 | 17.91 |
| CDY27314 | Canola | nucleus | 23.1 | 17.78 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 22.74 | 17.75 |
| CDY40213 | Canola | nucleus | 22.74 | 17.75 |
| CDX81292 | Canola | nucleus | 18.05 | 17.73 |
| CDX77212 | Canola | nucleus | 21.3 | 17.35 |
| CDX95139 | Canola | nucleus | 20.94 | 17.26 |
| CDY31735 | Canola | nucleus | 21.3 | 17.15 |
| CDX76102 | Canola | nucleus | 23.1 | 16.8 |
| CDY61965 | Canola | nucleus | 18.77 | 16.72 |
| CDY06274 | Canola | nucleus | 18.05 | 15.92 |
| CDY55549 | Canola | nucleus | 23.1 | 15.92 |
| CDX80822 | Canola | nucleus | 23.1 | 15.76 |
| CDY55422 | Canola | nucleus | 22.38 | 15.46 |
| CDY04855 | Canola | nucleus | 22.38 | 15.27 |
| CDY24798 | Canola | nucleus | 22.74 | 13.91 |
| CDY08776 | Canola | nucleus | 3.25 | 10.47 |
| Os03t0276300-00 | Rice | cytosol | 1.44 | 2.88 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078DIG0 | EnsemblPlants:CDX88742 | ProteinID:CDX88742 | ProteinID:CDX88742.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00148796001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF78 | UniParc:UPI0004EDC36F |
| InterPro:Znf_Dof | : | : | : | : | : |
Description
BnaA03g09070D
Coordinates
chrLK031856:+:749337..751844
Molecular Weight (calculated)
30259.3 Da
IEP (calculated)
8.555
GRAVY (calculated)
-0.699
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPHHESYTF SGRTLCDNPT DLRSFSHSAL MDHLLQQQDV FGNYNKAREA MGGSCLDHDQ KKPSPATGAA RPQPPELAVR CPRCDSTNTK FCYYNNYSLS
101: QPRYFCKSCR RYWTKGGTLR NIPVGGGCRK NKRSATRSLR TTPEPASHDG KAFSGGIFGG YSNNDHIDLS LAFALLNKQP PGSSSQLGFG SSHQSDMESV
201: FGTSQQKGNA GYAFGSGSSG LDMAMSDPNK VLWGFPWQMN GESFGMMNMG GGGHVDQLDS GKEIWTNMNY INSGALM
101: QPRYFCKSCR RYWTKGGTLR NIPVGGGCRK NKRSATRSLR TTPEPASHDG KAFSGGIFGG YSNNDHIDLS LAFALLNKQP PGSSSQLGFG SSHQSDMESV
201: FGTSQQKGNA GYAFGSGSSG LDMAMSDPNK VLWGFPWQMN GESFGMMNMG GGGHVDQLDS GKEIWTNMNY INSGALM
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.