Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40213 | Canola | nucleus | 88.08 | 74.93 |
| CDY69145 | Canola | nucleus, plastid | 75.5 | 72.38 |
| CDX76102 | Canola | nucleus | 81.46 | 64.57 |
| AT3G55370.3 | Thale cress | nucleus | 74.5 | 61.14 |
| CDY70840 | Canola | nucleus | 18.21 | 48.67 |
| CDY07781 | Canola | nucleus | 31.13 | 43.93 |
| VIT_13s0019g01410.t01 | Wine grape | nucleus | 46.36 | 41.54 |
| CDX74947 | Canola | nucleus | 39.4 | 36.62 |
| CDY65260 | Canola | nucleus | 37.42 | 36.57 |
| CDX91370 | Canola | nucleus | 39.07 | 36.31 |
| CDX93365 | Canola | nucleus | 37.09 | 36.25 |
| CDX79743 | Canola | nucleus | 34.77 | 35.84 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 27.15 | 33.2 |
| CDY40358 | Canola | nucleus | 35.76 | 32.43 |
| CDY70704 | Canola | nucleus | 38.41 | 31.78 |
| CDY55422 | Canola | nucleus | 41.06 | 30.92 |
| CDY15624 | Canola | nucleus | 34.11 | 30.84 |
| CDY04855 | Canola | nucleus | 41.06 | 30.54 |
| CDY61965 | Canola | nucleus | 30.79 | 29.9 |
| CDX77212 | Canola | nucleus | 33.44 | 29.71 |
| CDY31735 | Canola | nucleus | 33.77 | 29.65 |
| CDY06274 | Canola | nucleus | 30.79 | 29.62 |
| CDY55549 | Canola | nucleus | 39.4 | 29.6 |
| CDX80822 | Canola | nucleus | 39.74 | 29.56 |
| CDX95139 | Canola | nucleus | 32.45 | 29.17 |
| CDY08775 | Canola | nucleus | 18.21 | 28.06 |
| CDY53379 | Canola | nucleus | 19.21 | 26.48 |
| CDX87189 | Canola | nucleus | 20.86 | 25.2 |
| CDY16836 | Canola | nucleus | 22.19 | 25.09 |
| CDY70666 | Canola | nucleus | 24.5 | 24.92 |
| CDY72049 | Canola | nucleus | 24.5 | 24.92 |
| CDY29082 | Canola | nucleus | 19.54 | 24.58 |
| CDY70312 | Canola | nucleus | 22.85 | 24.3 |
| CDX90602 | Canola | nucleus | 19.21 | 24.07 |
| CDY40813 | Canola | nucleus | 22.19 | 23.67 |
| CDY31568 | Canola | nucleus | 20.2 | 23.64 |
| CDY72657 | Canola | nucleus | 22.85 | 23.63 |
| CDX78095 | Canola | nucleus | 18.87 | 23.55 |
| CDX77184 | Canola | nucleus | 19.87 | 23.44 |
| CDX80191 | Canola | nucleus | 19.87 | 23.35 |
| CDX71050 | Canola | nucleus | 19.54 | 23.32 |
| CDY33948 | Canola | nucleus | 23.18 | 23.18 |
| CDY35729 | Canola | nucleus | 22.85 | 23.08 |
| CDX81292 | Canola | nucleus | 21.52 | 23.05 |
| CDY66590 | Canola | nucleus | 24.83 | 22.94 |
| CDY09221 | Canola | nucleus | 19.54 | 22.87 |
| CDY42836 | Canola | nucleus | 21.52 | 22.73 |
| CDY37834 | Canola | nucleus | 22.85 | 22.7 |
| CDY71684 | Canola | nucleus | 25.17 | 22.69 |
| CDY03494 | Canola | nucleus | 25.83 | 22.67 |
| CDY15678 | Canola | nucleus | 24.5 | 22.63 |
| CDY59600 | Canola | nucleus | 18.21 | 22.54 |
| CDX90142 | Canola | nucleus | 23.51 | 22.47 |
| CDX92613 | Canola | nucleus | 25.5 | 22.45 |
| CDY71763 | Canola | nucleus | 25.5 | 22.45 |
| CDX88742 | Canola | nucleus | 20.53 | 22.38 |
| CDY02191 | Canola | nucleus | 21.52 | 22.11 |
| CDY70838 | Canola | nucleus | 22.19 | 21.9 |
| CDY51722 | Canola | nucleus | 19.87 | 21.58 |
| CDX86775 | Canola | nucleus | 22.19 | 21.54 |
| CDY07156 | Canola | nucleus | 19.87 | 21.51 |
| CDX71704 | Canola | nucleus | 23.84 | 21.49 |
| CDX80030 | Canola | nucleus | 25.83 | 21.43 |
| CDY64622 | Canola | nucleus | 22.85 | 21.36 |
| CDY35454 | Canola | nucleus | 23.84 | 21.05 |
| CDY41539 | Canola | nucleus | 25.5 | 21.04 |
| CDY50231 | Canola | nucleus | 17.22 | 20.55 |
| CDY57876 | Canola | nucleus | 24.5 | 20.5 |
| CDX95706 | Canola | nucleus | 24.83 | 20.33 |
| CDX83357 | Canola | nucleus | 25.17 | 20.32 |
| CDY16754 | Canola | nucleus | 22.85 | 20.29 |
| CDX87270 | Canola | nucleus | 22.85 | 20.23 |
| CDX89134 | Canola | extracellular, vacuole | 23.18 | 20.11 |
| CDY04620 | Canola | nucleus | 16.89 | 20.08 |
| CDY61727 | Canola | nucleus | 24.83 | 20.05 |
| CDY00373 | Canola | nucleus | 17.22 | 20.0 |
| CDY27314 | Canola | nucleus | 23.51 | 19.72 |
| CDY61064 | Canola | nucleus | 16.89 | 19.54 |
| CDY08392 | Canola | nucleus | 21.85 | 19.53 |
| CDY00341 | Canola | nucleus | 22.85 | 18.75 |
| CDX84369 | Canola | nucleus | 22.85 | 18.6 |
| CDY24798 | Canola | nucleus | 23.84 | 15.89 |
| CDY08776 | Canola | nucleus | 2.32 | 8.14 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078C990 | EnsemblPlants:CDX73385 | ProteinID:CDX73385 | ProteinID:CDX73385.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00108851001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI0004EE6374 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaC08g26180D
Coordinates
chrLK031799:-:1084..2973
Molecular Weight (calculated)
33433.7 Da
IEP (calculated)
9.399
GRAVY (calculated)
-0.738
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSLPVNQ FDSHNWQQQG NTQQLDRVTS DQNPLSHFSS PPGSRAGSSQ TRENSMVERA RIAKIPLPEA ALKCPRCEST NTKFCYFNNY NLTQPRHFCK
101: TCRRYWTRGG ALRNVPVGGG FRRNKRSKPK STVVVSADNN NTSSSLSCHT RYSSPSKFLS YGQLPGFDSN FPILPPFQSL GDYNMSGMSS SGGILDPWRI
201: SSMQQVQQSP FLINTKGLEE SSNVMYPSLE GNEGTAQARY VKAEENDRGG NGVNNLSRNF LGNINIKPVE ENDGYTCWGS SSNISSSWTG FTSNNSTGHL
301: SF
101: TCRRYWTRGG ALRNVPVGGG FRRNKRSKPK STVVVSADNN NTSSSLSCHT RYSSPSKFLS YGQLPGFDSN FPILPPFQSL GDYNMSGMSS SGGILDPWRI
201: SSMQQVQQSP FLINTKGLEE SSNVMYPSLE GNEGTAQARY VKAEENDRGG NGVNNLSRNF LGNINIKPVE ENDGYTCWGS SSNISSSWTG FTSNNSTGHL
301: SF
001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.