Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42836 | Canola | nucleus | 95.05 | 94.06 |
| Bra029352.1-P | Field mustard | nucleus | 91.17 | 92.81 |
| CDY02191 | Canola | nucleus | 84.81 | 81.63 |
| CDX87189 | Canola | nucleus | 68.55 | 77.6 |
| CDY16836 | Canola | nucleus | 71.02 | 75.28 |
| AT5G60850.1 | Thale cress | nucleus | 79.86 | 73.62 |
| CDY70840 | Canola | nucleus | 18.37 | 46.02 |
| KRH56758 | Soybean | nucleus | 44.52 | 43.15 |
| KRH03180 | Soybean | nucleus | 45.23 | 42.67 |
| PGSC0003DMT400010397 | Potato | nucleus | 45.58 | 40.44 |
| KRH54755 | Soybean | nucleus | 42.05 | 39.27 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 43.11 | 38.36 |
| KRH63162 | Soybean | nucleus | 42.05 | 34.9 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 20.14 | 29.23 |
| Zm00001d051700_P001 | Maize | mitochondrion | 25.44 | 28.46 |
| CDY07781 | Canola | nucleus | 20.85 | 27.57 |
| CDY08775 | Canola | nucleus | 18.73 | 27.04 |
| CDY53379 | Canola | nucleus | 20.49 | 26.48 |
| Os02t0726300-01 | Rice | nucleus | 26.15 | 26.24 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 25.8 | 25.17 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 25.44 | 24.91 |
| TraesCS6A01G287700.1 | Wheat | nucleus | 25.44 | 24.74 |
| TraesCS7D01G215300.1 | Wheat | nucleus | 24.73 | 24.65 |
| HORVU7Hr1G043250.2 | Barley | nucleus | 24.38 | 24.3 |
| TraesCS7A01G213400.1 | Wheat | nucleus | 24.38 | 24.3 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 20.14 | 24.05 |
| Zm00001d017900_P001 | Maize | nucleus | 25.44 | 24.0 |
| Os06t0284500-00 | Rice | nucleus | 24.38 | 23.88 |
| CDX77184 | Canola | nucleus | 20.85 | 23.05 |
| CDX80191 | Canola | nucleus | 20.85 | 22.96 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.61 | 22.94 |
| CDY70312 | Canola | nucleus | 22.97 | 22.89 |
| CDY09221 | Canola | nucleus | 20.85 | 22.87 |
| CDY31568 | Canola | nucleus | 20.85 | 22.87 |
| KXG30845 | Sorghum | nucleus | 24.38 | 22.7 |
| CDX71050 | Canola | nucleus | 20.14 | 22.53 |
| CDY51722 | Canola | nucleus | 21.91 | 22.3 |
| CDY72657 | Canola | nucleus | 22.97 | 22.26 |
| CDY07156 | Canola | nucleus | 21.91 | 22.22 |
| CDY69145 | Canola | nucleus, plastid | 24.73 | 22.22 |
| CDX73385 | Canola | nucleus | 23.67 | 22.19 |
| CDY50231 | Canola | nucleus | 19.79 | 22.13 |
| CDY29082 | Canola | nucleus | 18.73 | 22.08 |
| CDY04620 | Canola | nucleus | 19.79 | 22.05 |
| CDX90602 | Canola | nucleus | 18.73 | 21.99 |
| CDY00373 | Canola | nucleus | 20.14 | 21.92 |
| CDX78095 | Canola | nucleus | 18.73 | 21.9 |
| CDY59600 | Canola | nucleus | 18.73 | 21.72 |
| CDX81292 | Canola | nucleus | 21.55 | 21.63 |
| CDY33948 | Canola | nucleus | 22.97 | 21.52 |
| CDY61064 | Canola | nucleus | 19.79 | 21.46 |
| TraesCS7B01G120600.1 | Wheat | nucleus | 24.03 | 21.32 |
| CDX79743 | Canola | nucleus | 21.91 | 21.16 |
| CDY37834 | Canola | nucleus | 22.61 | 21.05 |
| CDX93365 | Canola | nucleus | 22.97 | 21.04 |
| CDY65260 | Canola | nucleus | 22.97 | 21.04 |
| CDX88742 | Canola | nucleus | 20.49 | 20.94 |
| CDX80030 | Canola | nucleus | 26.86 | 20.88 |
| CDY03494 | Canola | nucleus | 25.09 | 20.64 |
| CDY71684 | Canola | nucleus | 24.38 | 20.6 |
| CDY70838 | Canola | nucleus | 22.26 | 20.59 |
| CDY41539 | Canola | nucleus | 26.5 | 20.49 |
| CDY35454 | Canola | nucleus | 24.73 | 20.47 |
| CDY35729 | Canola | nucleus | 21.55 | 20.4 |
| CDY15624 | Canola | nucleus | 24.03 | 20.36 |
| CDX74947 | Canola | nucleus | 23.32 | 20.31 |
| CDX95139 | Canola | nucleus | 24.03 | 20.24 |
| CDY40358 | Canola | nucleus | 23.67 | 20.12 |
| CDX92613 | Canola | nucleus | 24.38 | 20.12 |
| CDY71763 | Canola | nucleus | 24.38 | 20.12 |
| CDX91370 | Canola | nucleus | 22.97 | 20.0 |
| CDX86775 | Canola | nucleus | 21.91 | 19.94 |
| CDY15678 | Canola | nucleus | 22.97 | 19.88 |
| CDY66590 | Canola | nucleus | 22.97 | 19.88 |
| CDY70666 | Canola | nucleus | 20.85 | 19.87 |
| CDY72049 | Canola | nucleus | 20.85 | 19.87 |
| CDY27314 | Canola | nucleus | 25.09 | 19.72 |
| CDX77212 | Canola | nucleus | 23.67 | 19.71 |
| CDY61727 | Canola | nucleus | 25.8 | 19.52 |
| CDY64622 | Canola | nucleus | 22.26 | 19.5 |
| CDY31735 | Canola | nucleus | 23.67 | 19.48 |
| CDX87270 | Canola | nucleus | 23.32 | 19.35 |
| CDY00341 | Canola | nucleus | 25.09 | 19.29 |
| CDY08392 | Canola | nucleus | 22.97 | 19.23 |
| CDX76102 | Canola | nucleus | 25.8 | 19.16 |
| CDY16754 | Canola | nucleus | 22.97 | 19.12 |
| CDX71704 | Canola | nucleus | 22.61 | 19.1 |
| CDX90142 | Canola | nucleus | 21.2 | 18.99 |
| CDY40213 | Canola | nucleus | 23.67 | 18.87 |
| CDX84369 | Canola | nucleus | 24.73 | 18.87 |
| CDX83357 | Canola | nucleus | 24.38 | 18.45 |
| CDX95706 | Canola | nucleus | 24.03 | 18.43 |
| CDY70704 | Canola | nucleus | 23.67 | 18.36 |
| CDX89134 | Canola | extracellular, vacuole | 22.26 | 18.1 |
| CDY61965 | Canola | nucleus | 19.79 | 18.01 |
| CDY57876 | Canola | nucleus | 22.61 | 17.73 |
| CDY06274 | Canola | nucleus | 19.43 | 17.52 |
| CDY55422 | Canola | nucleus | 24.73 | 17.46 |
| CDY55549 | Canola | nucleus | 24.73 | 17.41 |
| CDX80822 | Canola | nucleus | 24.73 | 17.24 |
| CDY04855 | Canola | nucleus | 24.73 | 17.24 |
| CDY24798 | Canola | nucleus | 25.09 | 15.67 |
| CDY08776 | Canola | nucleus | 3.18 | 10.47 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078HVK4 | UniProt:A0A078HVK4 | EnsemblPlants:CDY40813 | ProteinID:CDY40813 | ProteinID:CDY40813.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00071737001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF71 | UniParc:UPI0004EE25E9 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g41820DBnaC02g41820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVK4]
Coordinates
chrLK032479:+:240889..241893
Molecular Weight (calculated)
30475.9 Da
IEP (calculated)
7.498
GRAVY (calculated)
-0.770
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDIHDYSMT GGGGGGSTGR FYVGGGGGDR RMRAHQNNIL NHHLKCPRCN SLNTKFCYYN NYNLSQPRHF CKNCRRYWTK GGVLRNVPVG GGCRKAKRSK
101: PKQDQPPSSA DKSTAQEVEE KSSSSESSSL TASNSTTTAA AVKVASSGFM GTDMPNIKQY GNGVVWSTLF GQGSSDGGVF SEINGITAAI ETTPFGYGGS
201: SVNQQCIGDH PKFAGNTVQQ QFGDRTAQVD PSMGFEPLDW GSGGGDDQTL FDLTSTVDHS YWSQSQWTSS SDHQDDQNGL YLP
101: PKQDQPPSSA DKSTAQEVEE KSSSSESSSL TASNSTTTAA AVKVASSGFM GTDMPNIKQY GNGVVWSTLF GQGSSDGGVF SEINGITAAI ETTPFGYGGS
201: SVNQQCIGDH PKFAGNTVQQ QFGDRTAQVD PSMGFEPLDW GSGGGDDQTL FDLTSTVDHS YWSQSQWTSS SDHQDDQNGL YLP
001: MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
Arabidopsis Description
DOF5.4OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.