Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G317100.1 | Wheat | nucleus | 95.88 | 96.54 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 95.53 | 95.86 |
| Os02t0726300-01 | Rice | nucleus | 70.1 | 72.34 |
| Zm00001d051700_P001 | Maize | mitochondrion | 59.45 | 68.38 |
| Zm00001d017900_P001 | Maize | nucleus | 67.35 | 65.33 |
| KXG30845 | Sorghum | nucleus | 68.04 | 65.13 |
| TraesCS7A01G213400.1 | Wheat | nucleus | 43.99 | 45.07 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 23.71 | 35.38 |
| CDX87189 | Canola | nucleus | 23.02 | 26.8 |
| Bra035956.1-P | Field mustard | nucleus | 23.37 | 25.47 |
| CDY16836 | Canola | nucleus | 23.37 | 25.47 |
| CDY40813 | Canola | nucleus | 24.74 | 25.44 |
| KRH56758 | Soybean | nucleus | 25.43 | 25.34 |
| KRH54755 | Soybean | nucleus | 26.12 | 25.08 |
| Bra013003.1-P | Field mustard | nucleus | 25.09 | 24.83 |
| CDY02191 | Canola | nucleus | 25.09 | 24.83 |
| CDY42836 | Canola | nucleus | 24.4 | 24.83 |
| Bra029352.1-P | Field mustard | nucleus | 23.71 | 24.82 |
| AT5G60850.1 | Thale cress | nucleus | 26.12 | 24.76 |
| KRH03180 | Soybean | nucleus | 25.09 | 24.33 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 25.77 | 23.58 |
| PGSC0003DMT400010397 | Potato | nucleus | 25.43 | 23.2 |
| TraesCS5A01G401800.1 | Wheat | nucleus | 28.87 | 22.05 |
| KRH63162 | Soybean | nucleus | 24.74 | 21.11 |
| TraesCS6A01G274000.1 | Wheat | nucleus | 21.65 | 20.59 |
| TraesCS3A01G377000.1 | Wheat | nucleus | 23.02 | 20.24 |
| TraesCS3A01G539000.1 | Wheat | nucleus | 18.56 | 20.07 |
| TraesCS2A01G079200.1 | Wheat | nucleus | 21.99 | 19.63 |
| TraesCS1A01G275000.1 | Wheat | nucleus | 20.62 | 18.99 |
| TraesCS6A01G255500.1 | Wheat | nucleus | 25.43 | 18.88 |
| TraesCS2A01G402200.1 | Wheat | nucleus | 24.4 | 18.78 |
| TraesCS5A01G078100.1 | Wheat | nucleus | 21.99 | 18.71 |
| TraesCS1A01G035200.1 | Wheat | nucleus | 22.68 | 18.28 |
| TraesCS4A01G097800.1 | Wheat | nucleus | 23.37 | 17.75 |
| TraesCS5A01G155900.1 | Wheat | nucleus | 19.93 | 17.16 |
| TraesCS2A01G225900.1 | Wheat | nucleus, plastid | 20.96 | 17.13 |
| TraesCS3A01G532200.1 | Wheat | nucleus | 20.62 | 16.9 |
| TraesCS3A01G532000.1 | Wheat | nucleus | 20.62 | 16.13 |
| TraesCS3A01G532100.1 | Wheat | nucleus | 20.62 | 15.83 |
| TraesCS5A01G479400.1 | Wheat | nucleus | 23.37 | 14.56 |
| TraesCS6A01G233700.1 | Wheat | cytosol, mitochondrion, nucleus | 5.5 | 7.37 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G287700.1 | EnsemblPlantsGene:TraesCS6A01G287700 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF40 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr6A:-:520354982..520355857
Molecular Weight (calculated)
30385.1 Da
IEP (calculated)
5.376
GRAVY (calculated)
-0.420
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDFQSIPGL AGRLFGGAAA ADIRRVQGPA SRCGVFSQAA SAQPEAAVKC PRCESTNTKF CYYNNYNLSQ PRHFCKSCRR YWTKGGVLRN VPVGGGCRKA
101: KRSSSSASAP STPAATDAKS QRRASASSSS RSNSGSGSAS PTAAAEETTT TETEPPPPPT PSSNSNSNAV SFANRMTNYP FAADVPPPAP IFADQAAALA
201: SLFAPPPPPP LPVFSFSAEP KMEEAIGSLL LPGQEASQEP EEPTCTSTVA DMAPFMSLDA GIFELGDASP ADYWNGGSCW TDVQDPSVYL P
101: KRSSSSASAP STPAATDAKS QRRASASSSS RSNSGSGSAS PTAAAEETTT TETEPPPPPT PSSNSNSNAV SFANRMTNYP FAADVPPPAP IFADQAAALA
201: SLFAPPPPPP LPVFSFSAEP KMEEAIGSLL LPGQEASQEP EEPTCTSTVA DMAPFMSLDA GIFELGDASP ADYWNGGSCW TDVQDPSVYL P
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.