Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G287700.1 | Wheat | nucleus | 96.54 | 95.88 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 94.12 | 93.79 |
| Os02t0726300-01 | Rice | nucleus | 69.55 | 71.28 |
| Zm00001d051700_P001 | Maize | mitochondrion | 58.13 | 66.4 |
| Zm00001d017900_P001 | Maize | nucleus | 67.13 | 64.67 |
| KXG30845 | Sorghum | nucleus | 67.82 | 64.47 |
| TraesCS7B01G120600.1 | Wheat | nucleus | 43.25 | 39.19 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 23.88 | 35.38 |
| CDX87189 | Canola | nucleus | 23.18 | 26.8 |
| Bra035956.1-P | Field mustard | nucleus | 23.53 | 25.47 |
| CDY16836 | Canola | nucleus | 23.53 | 25.47 |
| CDY40813 | Canola | nucleus | 24.91 | 25.44 |
| KRH56758 | Soybean | nucleus | 25.61 | 25.34 |
| KRH54755 | Soybean | nucleus | 26.3 | 25.08 |
| AT5G60850.1 | Thale cress | nucleus | 26.64 | 25.08 |
| Bra013003.1-P | Field mustard | nucleus | 25.26 | 24.83 |
| CDY02191 | Canola | nucleus | 25.26 | 24.83 |
| CDY42836 | Canola | nucleus | 24.57 | 24.83 |
| Bra029352.1-P | Field mustard | nucleus | 23.88 | 24.82 |
| KRH03180 | Soybean | nucleus | 25.26 | 24.33 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 25.95 | 23.58 |
| PGSC0003DMT400010397 | Potato | nucleus | 25.61 | 23.2 |
| TraesCS5B01G406500.1 | Wheat | nucleus | 30.1 | 22.77 |
| KRH63162 | Soybean | nucleus | 24.91 | 21.11 |
| TraesCS6B01G301500.1 | Wheat | nucleus | 21.45 | 20.26 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 22.49 | 19.64 |
| TraesCS2B01G094000.1 | Wheat | nucleus | 22.15 | 19.39 |
| TraesCS6B01G270100.1 | Wheat | nucleus | 25.61 | 19.02 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 20.76 | 18.99 |
| TraesCS2B01G420400.1 | Wheat | nucleus | 24.22 | 18.62 |
| TraesCS5B01G087600.3 | Wheat | nucleus | 22.15 | 18.6 |
| TraesCS4B01G206800.1 | Wheat | nucleus | 23.53 | 17.99 |
| TraesCS1B01G045000.3 | Wheat | nucleus | 22.49 | 17.71 |
| TraesCS3B01G609100.1 | Wheat | nucleus | 21.11 | 17.58 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 21.45 | 17.46 |
| TraesCS3B01G608900.1 | Wheat | nucleus | 20.42 | 16.62 |
| TraesCS5B01G154100.1 | Wheat | nucleus | 19.38 | 16.57 |
| TraesCS3B01G609000.1 | Wheat | nucleus | 20.07 | 16.48 |
| TraesCS3B01G608800.1 | Wheat | nucleus | 20.76 | 15.96 |
| TraesCS5B01G492600.1 | Wheat | nucleus | 23.18 | 14.82 |
| TraesCS1B01G185700.1 | Wheat | cytosol | 5.54 | 7.37 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G317100.1 | EnsemblPlantsGene:TraesCS6B01G317100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF40 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr6B:-:564992876..564993745
Molecular Weight (calculated)
30307.1 Da
IEP (calculated)
5.977
GRAVY (calculated)
-0.401
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDFQSIPGL AGRLFGGAAA ADIRRVQGPA SRCGVFSQAA SAQPEAAVKC PRCESTNTKF CYYNNYNLSQ PRHFCKSCRR YWTKGGVLRN VPVGGGCRKA
101: KRSSSSASAP STPAATDAKS QRRASASSSS RSNNGSVSPT AAAEETTTTE TDPPPPPTPS SNSNSNTVAF ANRMTNYPFA ADVPPPAPIF ADQAAALASL
201: FAPPPPPPLP VFNFSAEPKM EEAIGSLLLP GQVPAQETEE PTCTSTVADM APFMSLDAGI FELGDASPAD YWNGGSCWTD VQDPSVYLP
101: KRSSSSASAP STPAATDAKS QRRASASSSS RSNNGSVSPT AAAEETTTTE TDPPPPPTPS SNSNSNTVAF ANRMTNYPFA ADVPPPAPIF ADQAAALASL
201: FAPPPPPPLP VFNFSAEPKM EEAIGSLLLP GQVPAQETEE PTCTSTVADM APFMSLDAGI FELGDASPAD YWNGGSCWTD VQDPSVYLP
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.