Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G215300.1 | Wheat | nucleus | 81.5 | 91.55 |
| TraesCS7A01G213400.1 | Wheat | nucleus | 79.0 | 88.73 |
| HORVU7Hr1G043250.2 | Barley | nucleus | 77.74 | 87.32 |
| Os06t0284500-00 | Rice | nucleus | 52.98 | 58.48 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 39.19 | 43.25 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 21.32 | 28.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.94 | 25.09 |
| KRH56758 | Soybean | nucleus | 22.88 | 25.0 |
| CDX87189 | Canola | nucleus | 19.12 | 24.4 |
| Bra029352.1-P | Field mustard | nucleus | 21.0 | 24.1 |
| CDY40813 | Canola | nucleus | 21.32 | 24.03 |
| KRH03180 | Soybean | nucleus | 22.57 | 24.0 |
| Bra035956.1-P | Field mustard | nucleus | 20.06 | 23.97 |
| CDY16836 | Canola | nucleus | 20.06 | 23.97 |
| CDY42836 | Canola | nucleus | 21.32 | 23.78 |
| TraesCS5B01G406500.1 | Wheat | nucleus | 28.21 | 23.56 |
| KRH54755 | Soybean | nucleus | 21.94 | 23.1 |
| AT5G60850.1 | Thale cress | nucleus | 21.94 | 22.8 |
| PGSC0003DMT400010397 | Potato | nucleus | 22.57 | 22.57 |
| CDY02191 | Canola | nucleus | 20.69 | 22.45 |
| Bra013003.1-P | Field mustard | nucleus | 20.69 | 22.45 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 21.94 | 22.01 |
| KRH63162 | Soybean | nucleus | 21.63 | 20.23 |
| TraesCS2B01G094000.1 | Wheat | nucleus | 20.69 | 20.0 |
| TraesCS6B01G301500.1 | Wheat | nucleus | 18.81 | 19.61 |
| TraesCS5B01G087600.3 | Wheat | nucleus | 20.38 | 18.9 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 19.44 | 18.73 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 18.5 | 18.67 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 20.38 | 18.31 |
| TraesCS6B01G270100.1 | Wheat | nucleus | 20.69 | 16.97 |
| TraesCS5B01G154100.1 | Wheat | nucleus | 17.87 | 16.86 |
| TraesCS2B01G420400.1 | Wheat | nucleus | 19.75 | 16.76 |
| TraesCS3B01G608900.1 | Wheat | nucleus | 18.5 | 16.62 |
| TraesCS4B01G206800.1 | Wheat | nucleus | 19.44 | 16.4 |
| TraesCS1B01G045000.3 | Wheat | nucleus | 18.81 | 16.35 |
| TraesCS3B01G609100.1 | Wheat | nucleus | 17.55 | 16.14 |
| TraesCS3B01G609000.1 | Wheat | nucleus | 17.24 | 15.62 |
| TraesCS3B01G608800.1 | Wheat | nucleus | 18.18 | 15.43 |
| TraesCS5B01G492600.1 | Wheat | nucleus | 20.38 | 14.38 |
| TraesCS1B01G185700.1 | Wheat | cytosol | 4.08 | 5.99 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G120600.1 | EnsemblPlantsGene:TraesCS7B01G120600 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF40 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr7B:+:140652691..140653650
Molecular Weight (calculated)
32926.1 Da
IEP (calculated)
8.395
GRAVY (calculated)
-0.378
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MESPGRAEQI DSKLRKLAPS SRQAPPSLRH VRAVHGMQEF QPIPGLAGRL FGGAADRPAG LLRHGGAPEE VRCPRCDSAN TKFCYYNNYN LSQPRHFCKG
101: CRRYWTKGGL LRNVPVGGGC RKPKRKAAAA SSSDVDKDPS GANSEAKNAR SGCSAGSSSL TSGASSASTN TVNDVGACAA AHSSGGSMPF TGLGPSTFIA
201: DAPPLQPPTA MFTDQAAAFA SLFGTPLPAF TFSAQRKAED DVAPAVTSTE QPSSASSTAD LAPFSARSTG AATASASDWP PATMIDAGIF DIAGAVGSDT
301: TSYWNTASWT DPDGTVYLP
101: CRRYWTKGGL LRNVPVGGGC RKPKRKAAAA SSSDVDKDPS GANSEAKNAR SGCSAGSSSL TSGASSASTN TVNDVGACAA AHSSGGSMPF TGLGPSTFIA
201: DAPPLQPPTA MFTDQAAAFA SLFGTPLPAF TFSAQRKAED DVAPAVTSTE QPSSASSTAD LAPFSARSTG AATASASDWP PATMIDAGIF DIAGAVGSDT
301: TSYWNTASWT DPDGTVYLP
001: MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
Arabidopsis Description
DOF5.4OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.