Factsheet for TraesCS5B01G154100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G155900.1	Wheat	nucleus	89.35	89.35
TraesCS5D01G161000.1	Wheat	nucleus	87.57	86.55
HORVU5Hr1G048700.1	Barley	nucleus	82.84	84.08
Os02t0252400-01	Rice	nucleus	41.72	37.8
TraesCS2B01G420400.1	Wheat	nucleus	25.74	23.14
TraesCS6B01G270100.1	Wheat	nucleus	26.63	23.14
GSMUA_Achr6P19530_001	Banana	nucleus	15.98	21.86
TraesCS6B01G301500.1	Wheat	nucleus	19.53	21.57
TraesCS2B01G094000.1	Wheat	nucleus	18.93	19.39
TraesCS6B01G317100.1	Wheat	nucleus	16.57	19.38
TraesCS1B01G284300.1	Wheat	nucleus	17.46	18.67
TraesCS3B01G409600.1	Wheat	nucleus	18.05	18.43
TraesCS5B01G087600.3	Wheat	nucleus	18.64	18.31
TraesCS7B01G120600.1	Wheat	nucleus	16.86	17.87
TraesCS2B01G249200.1	Wheat	nucleus, plastid	18.34	17.46
TraesCS4B01G206800.1	Wheat	nucleus	19.53	17.46
TraesCS3B01G608900.1	Wheat	nucleus	16.86	16.06
TraesCS1B01G045000.3	Wheat	nucleus	16.86	15.53
TraesCS3B01G609000.1	Wheat	nucleus	15.68	15.06
TraesCS5B01G406500.1	Wheat	nucleus	16.86	14.92
TraesCS3B01G609100.1	Wheat	nucleus	15.09	14.7
TraesCS3B01G608800.1	Wheat	nucleus	16.27	14.63
TraesCS1B01G185700.1	Wheat	cytosol	8.28	12.9
TraesCS5B01G492600.1	Wheat	nucleus	16.27	12.17

Protein Annotations

EnsemblPlants:TraesCS5B01G154100.1	EnsemblPlantsGene:TraesCS5B01G154100	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	InterPro:Znf_Dof	PANTHER:PTHR31992	PANTHER:PTHR31992:SF15	PFAM:PD007478	PFAM:PF02701
PFscan:PS50884	ScanProsite:PS01361	SEG:seg	MapMan:15.5.1.5	:	:

Description

No Description!

Coordinates

chr5B:-:283623197..283625483

Molecular Weight (calculated)

35209.3 Da

IEP (calculated)

8.549

GRAVY (calculated)

-0.464

Length

338 amino acids

Sequence
(BLAST)

001: MFCCWPQVLK MEEVFPSNSK SKAGQMAGEA TAAAEKKPRP KPEQKVECPR CKSGNTKFCY YNNYSMSQPR YFCKACRRYW THGGSLRNVP IGGGCRKPKR
101: SGTSDAHKLG VASSSEHTAV MPPSTCTGIN FANVLPTFMS AGFEIPRSLS LTTFGSSSSS NTTAVMSPGG TTSFLDVLRG GTGGLLDGNL GQNNGYYYGG
201: SRSGIGMLMT PPAASFGIPG PMQQHGDLMV GGNGIGAATA SIFQGGTGEE GDDGIGAMMG LQWQPHVGNG GGGGVVSGGV HHLGTGNNVT MGNNNINNNN
301: NNGSHSDDNT GGSSRDCYWI NNGGSNPWQS LLNSSSLM

Best Arabidopsis Sequence Match ( AT4G21050.1 )
(BLAST)

001: MDNLNVFANE DNQVNGLKRP PPSRVCPRCD SDNTKFCFYN NYSESQPRYF CKNCRRYWTH GGALRNIPVG GSCRKPKRLK VDQSSISEMV SVENQPINHQ
101: SFRQTQENNE FVRSFDASSS ATVTAVPNHF GYLSELHGVT NLLPIQSFRT MDCLDFGDES FQQGYYDVGS NDLIDNPLIN QSIGGYVDNL TSYCINQVEP
201: KLQPRYEHES

Arabidopsis Description

DOF4.4Dof zinc finger protein DOF4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUA9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.