Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G493000.1 Wheat nucleus 97.12 96.48
TraesCS5A01G479400.1 Wheat nucleus 95.8 92.72
HORVU5Hr1G113220.6 Barley nucleus 92.04 92.44
Os03t0821200-00 Rice nucleus 61.73 67.39
KXG37254 Sorghum nucleus 63.72 66.21
Zm00001d034651_P002 Maize nucleus 57.96 63.44
CDY07781 Canola nucleus 23.67 50.0
GSMUA_Achr6P33410_001 Banana nucleus 26.55 48.58
VIT_08s0007g00180.t01 Wine grape nucleus 35.18 46.09
Bra000008.1-P Field mustard nucleus 27.21 41.98
AT2G37590.1 Thale cress nucleus 30.31 41.52
CDX93365 Canola nucleus 28.1 41.1
Bra005181.1-P Field mustard nucleus 29.2 40.62
CDX79743 Canola nucleus 26.33 40.61
Solyc10g086440.1.1 Tomato nucleus 32.52 40.61
CDY65260 Canola nucleus 27.65 40.45
CDX74947 Canola nucleus 28.98 40.31
Bra017171.1-P Field mustard nucleus 27.43 40.13
CDX91370 Canola nucleus 28.76 40.0
PGSC0003DMT400049288 Potato nucleus 32.74 39.57
TraesCS4B01G206800.1 Wheat nucleus 30.31 36.24
TraesCS5B01G087600.3 Wheat nucleus 27.43 36.05
TraesCS3B01G608800.1 Wheat nucleus 26.55 31.91
TraesCS1B01G045000.3 Wheat nucleus 25.89 31.88
TraesCS3B01G608900.1 Wheat nucleus 25.0 31.83
TraesCS3B01G609100.1 Wheat nucleus 23.67 30.84
TraesCS3B01G609000.1 Wheat nucleus 23.23 29.83
TraesCS2B01G094000.1 Wheat nucleus 17.48 23.94
TraesCS2B01G420400.1 Wheat nucleus 19.69 23.67
TraesCS6B01G301500.1 Wheat nucleus 15.93 23.53
TraesCS6B01G270100.1 Wheat nucleus 20.13 23.39
TraesCS2B01G249200.1 Wheat nucleus, plastid 18.36 23.38
TraesCS6B01G317100.1 Wheat nucleus 14.82 23.18
TraesCS3B01G409600.1 Wheat nucleus 15.93 21.75
TraesCS1B01G284300.1 Wheat nucleus 15.04 21.52
TraesCS7B01G120600.1 Wheat nucleus 14.38 20.38
TraesCS5B01G406500.1 Wheat nucleus 15.49 18.32
TraesCS5B01G154100.1 Wheat nucleus 12.17 16.27
TraesCS1B01G185700.1 Wheat cytosol 5.53 11.52
Protein Annotations
EnsemblPlants:TraesCS5B01G492600.1EnsemblPlantsGene:TraesCS5B01G492600GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
InterPro:IPR003851InterPro:Znf_DofPANTHER:PTHR31992PANTHER:PTHR31992:SF66PFAM:PD007478PFAM:PF02701
PFscan:PS50884ScanProsite:PS01361SEG:segMapMan:15.5.1.5::
Description
No Description!
Coordinates
chr5B:+:660588862..660590474
Molecular Weight (calculated)
46276.9 Da
IEP (calculated)
9.419
GRAVY (calculated)
-0.588
Length
452 amino acids
Sequence
(BLAST)
001: MVFSSVPLYH DPPNWNQNHS QQQQQQLQQQ QQQQLSQHGQ MFASGGGGGG MEMHHHHQQQ QHQQYQQQQL QQHQLRPPVP PSGALMAPRP DGMGSPVALS
101: GAGGGGGGAG GGLTGGAVVR PGSMTDKARM AKIPQPEPGL KCPRCESTNT KFCYFNNYSL TQPRHFCKTC RRYWTRGGTL RNVPVGGGCR RNKRTKSSKS
201: SSSAASASGG GTSSSTTSST TTAGGGNGNG STAAGAAGAM MSSQGQGHAQ MPFFGSLHPL GAGSGDHYGT GASRLGFPGL INSLDPVDYQ LGGGGAAAAA
301: MALSEQWRLP QMQQFPFFGR ADGMHQQQQQ MAGLYPFDAT DASGFAGEMM GGVGGSKQLV PGSAGLITQL ASVKMEDNPP SNNSMAGAAS AREFLGLPGN
401: IQFWGGGNNG AGGNENGGSH SSGTVAPGGA GGGGGWVDQL PGFNSSSSGN IL
Best Arabidopsis Sequence Match ( AT2G37590.1 )
(BLAST)
001: MVFSSIQAYL DSSNWQQAPP SNYNHDGTGA SANGGHVLRP QLQPQQQPQQ QPHPNGSGGG GGGGGGSIRA GSMVDRARQA NVALPEAALK CPRCESTNTK
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
Arabidopsis Description
DOF2.4Dof zinc finger protein DOF2.4 [Source:UniProtKB/Swiss-Prot;Acc:O80928]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.