Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G399500.1 | Wheat | nucleus | 97.87 | 97.35 |
| TraesCS1B01G185700.1 | Wheat | cytosol | 55.59 | 96.31 |
| TraesCS2A01G402200.1 | Wheat | nucleus | 96.81 | 96.3 |
| KXG26925 | Sorghum | nucleus | 68.09 | 65.98 |
| Os02t0673700-01 | Rice | nucleus | 61.7 | 60.89 |
| TraesCS6B01G270100.1 | Wheat | nucleus | 60.11 | 58.1 |
| Zm00001d002642_P001 | Maize | nucleus | 67.02 | 52.61 |
| KRG97209 | Soybean | nucleus | 29.79 | 44.44 |
| KRH68931 | Soybean | nucleus | 32.18 | 41.3 |
| AT3G61850.4 | Thale cress | nucleus | 32.18 | 37.35 |
| CDX71704 | Canola | nucleus | 31.38 | 35.22 |
| AT2G46590.2 | Thale cress | nucleus | 34.31 | 34.96 |
| CDX80030 | Canola | nucleus | 33.78 | 34.89 |
| CDX95706 | Canola | nucleus | 34.04 | 34.69 |
| Bra000429.1-P | Field mustard | nucleus | 34.04 | 34.69 |
| Bra004525.1-P | Field mustard | nucleus | 32.45 | 34.66 |
| Bra014418.1-P | Field mustard | nucleus | 28.46 | 34.52 |
| CDY61727 | Canola | nucleus | 34.31 | 34.49 |
| Bra039272.1-P | Field mustard | nucleus, plastid | 32.98 | 34.44 |
| CDY27314 | Canola | nucleus | 32.98 | 34.44 |
| CDY41539 | Canola | nucleus | 33.51 | 34.43 |
| CDX86775 | Canola | nucleus | 28.46 | 34.41 |
| CDX83357 | Canola | nucleus | 34.04 | 34.22 |
| CDY64622 | Canola | nucleus | 29.26 | 34.06 |
| CDY57876 | Canola | nucleus | 31.65 | 32.96 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 37.77 | 32.87 |
| CDX89134 | Canola | extracellular, vacuole | 29.26 | 31.61 |
| TraesCS6B01G301500.1 | Wheat | nucleus | 22.07 | 27.12 |
| TraesCS5B01G087600.3 | Wheat | nucleus | 23.94 | 26.16 |
| TraesCS5B01G154100.1 | Wheat | nucleus | 23.14 | 25.74 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 20.74 | 24.68 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 18.62 | 24.22 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 20.74 | 23.57 |
| TraesCS2B01G094000.1 | Wheat | nucleus | 19.95 | 22.73 |
| TraesCS4B01G206800.1 | Wheat | nucleus | 21.81 | 21.69 |
| TraesCS3B01G609000.1 | Wheat | nucleus | 19.41 | 20.74 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 19.41 | 20.56 |
| TraesCS3B01G609100.1 | Wheat | nucleus | 18.35 | 19.88 |
| TraesCS7B01G120600.1 | Wheat | nucleus | 16.76 | 19.75 |
| TraesCS3B01G608900.1 | Wheat | nucleus | 18.62 | 19.72 |
| TraesCS5B01G492600.1 | Wheat | nucleus | 23.67 | 19.69 |
| TraesCS1B01G045000.3 | Wheat | nucleus | 18.88 | 19.35 |
| TraesCS5B01G406500.1 | Wheat | nucleus | 18.09 | 17.8 |
| TraesCS3B01G608800.1 | Wheat | nucleus | 17.29 | 17.29 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G420400.1 | EnsemblPlantsGene:TraesCS2B01G420400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF28 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr2B:+:602762399..602764394
Molecular Weight (calculated)
38114.5 Da
IEP (calculated)
8.472
GRAVY (calculated)
-0.508
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAAHWPQGL GLVKPMEEML MGAPSANQQV QGSNPNPPAQ APSSAPGTGG PMRGGTPAMA VAGSGAGAGS TERRPRPQKE KAINCPRCNS TNTKFCYYNN
101: YSLQQPRYFC KTCRRYWTEG GSLRNVPVGG GSRKNKRSSS SSASASASAA ASATASVANS SMVGAAPNKN PKLAHEGAAH DLNLAFPHHQ GGMQADYMAF
201: PSLESSSMCN PGGGAMAGNG ARAGGALSAM ELLRSTGCYM PLQMPMQMPG EYGAAGFSLG EFRAPAPPQS QSLLGFSLDA HGPVGGASTA GYGSSAAMQG
301: LQDRSGRLLF AFEDLKPTAN SGAGGGESGG GSGAGVDGGD HQFEQGNKEQ QGNGTPVGQP DTPGFWNGMI GGGGTW
101: YSLQQPRYFC KTCRRYWTEG GSLRNVPVGG GSRKNKRSSS SSASASASAA ASATASVANS SMVGAAPNKN PKLAHEGAAH DLNLAFPHHQ GGMQADYMAF
201: PSLESSSMCN PGGGAMAGNG ARAGGALSAM ELLRSTGCYM PLQMPMQMPG EYGAAGFSLG EFRAPAPPQS QSLLGFSLDA HGPVGGASTA GYGSSAAMQG
301: LQDRSGRLLF AFEDLKPTAN SGAGGGESGG GSGAGVDGGD HQFEQGNKEQ QGNGTPVGQP DTPGFWNGMI GGGGTW
001: MDATKWTQGF QEMINVKPME QMISSTNNNT PQQQPTFIAT NTRPNATASN GGSGGNTNNT ATMETRKARP QEKVNCPRCN STNTKFCYYN NYSLTQPRYF
101: CKGCRRYWTE GGSLRNVPVG GSSRKNKRSS TPLASPSNPK LPDLNPPILF SSQIPNKSNK DLNLLSFPVM QDHHHHGMSH FFHMPKIENN NTSSSIYASS
201: SPVSALELLR SNGVSSRGMN TFLPGQMMDS NSVLYSSLGF PTMPDYKQSN NNLSFSIDHH QGIGHNTINS NQRAQDNNDD MNGASRVLFP FSDMKELSST
301: TQEKSHGNNT YWNGMFSNTG GSSW
101: CKGCRRYWTE GGSLRNVPVG GSSRKNKRSS TPLASPSNPK LPDLNPPILF SSQIPNKSNK DLNLLSFPVM QDHHHHGMSH FFHMPKIENN NTSSSIYASS
201: SPVSALELLR SNGVSSRGMN TFLPGQMMDS NSVLYSSLGF PTMPDYKQSN NNLSFSIDHH QGIGHNTINS NQRAQDNNDD MNGASRVLFP FSDMKELSST
301: TQEKSHGNNT YWNGMFSNTG GSSW
Arabidopsis Description
DAG1Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:B3H6D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.