Factsheet for TraesCS3B01G609000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G609100.1	Wheat	nucleus	87.22	88.47
TraesCS3B01G608900.1	Wheat	nucleus	75.85	75.21
TraesCS3A01G532200.1	Wheat	nucleus	75.57	74.93
HORVU3Hr1G116270.2	Barley	nucleus	70.74	71.55
TraesCS3A01G532100.1	Wheat	nucleus	75.57	70.18
TraesCS3D01G537500.1	Wheat	nucleus	74.15	68.32
TraesCS3B01G608800.1	Wheat	nucleus	34.09	31.91
Os05t0112200-01	Rice	nucleus	25.57	31.03
TraesCS1B01G045000.3	Wheat	nucleus	30.68	29.43
Zm00001d035651_P001	Maize	nucleus	29.55	28.49
KXG21095	Sorghum	nucleus	29.55	27.01
Zm00001d011058_P001	Maize	nucleus	24.72	25.74
TraesCS5B01G087600.3	Wheat	nucleus	24.43	25.0
KRH70477	Soybean	nucleus	24.72	23.45
TraesCS4B01G206800.1	Wheat	nucleus	25.0	23.28
TraesCS5B01G492600.1	Wheat	nucleus	29.83	23.23
KRH46814	Soybean	nucleus	23.86	22.89
KRG99864	Soybean	nucleus	22.73	22.04
TraesCS6B01G301500.1	Wheat	nucleus	17.9	20.59
TraesCS6B01G317100.1	Wheat	nucleus	16.48	20.07
TraesCS2B01G420400.1	Wheat	nucleus	20.74	19.41
TraesCS6B01G270100.1	Wheat	nucleus	20.74	18.77
TraesCS3B01G409600.1	Wheat	nucleus	17.33	18.43
TraesCS1B01G284300.1	Wheat	nucleus	16.48	18.35
TraesCS2B01G249200.1	Wheat	nucleus, plastid	18.47	18.31
TraesCS7B01G120600.1	Wheat	nucleus	15.62	17.24
TraesCS2B01G094000.1	Wheat	nucleus	15.62	16.67
TraesCS5B01G406500.1	Wheat	nucleus	17.33	15.97
TraesCS5B01G154100.1	Wheat	nucleus	15.06	15.68
TraesCS1B01G185700.1	Wheat	cytosol	3.98	6.45

Protein Annotations

EnsemblPlants:TraesCS3B01G609000.1	EnsemblPlantsGene:TraesCS3B01G609000	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	InterPro:Znf_Dof	PANTHER:PTHR31992	PANTHER:PTHR31992:SF75	PFAM:PD007478	PFAM:PF02701
PFscan:PS50884	ScanProsite:PS01361	SEG:seg	MapMan:15.5.1.5	:	:

Description

No Description!

Coordinates

chr3B:-:828292221..828293811

Molecular Weight (calculated)

37651.7 Da

IEP (calculated)

8.427

GRAVY (calculated)

-0.651

Length

352 amino acids

Sequence
(BLAST)

001: MIFLPAFLDS SNFWNTDNNQ LQLQQIGTNT HSTTTPSPSG PGDGGCNSNN EEGFMATAGV GLVAGGGGND GCSGAGDGDC STNRNSKSMS MSERAQLVRL
101: PQPVSGLNCP RCDSTNTKFC YFNNYSLTQP RHFCRSCRRY WTRGGALRNV PVGGGYRRHA KRRGKPNVVS NTSRSTAVGT SSVTTTMSSS TTYATGSGPV
201: PPGLHSPMFG SAPSHDSQFA HSFDQASLRL SSPDRLLFAD GGSCTVDGCA QHHHNHAHWN GMEQWSAAQM GSFQFMHAMD HQMSGAMPIT MATMQGMFHL
301: GLQSVAGGKD DNRGGHQLYH PSAKRNHKQQ DYSSSRGMYE DMVNGNGGGG YI

Best Arabidopsis Sequence Match ( AT3G55370.1 )
(BLAST)

001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF

Arabidopsis Description

OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.