CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035651_P001	Maize	nucleus	81.3	85.75
Zm00001d011058_P001	Maize	nucleus	69.35	78.99
Os05t0112200-01	Rice	nucleus	55.06	73.1
TraesCS1D01G036700.2	Wheat	nucleus	63.38	66.67
TraesCS1B01G045000.3	Wheat	nucleus	63.38	66.48
TraesCS1A01G035200.1	Wheat	nucleus	62.08	66.2
HORVU1Hr1G005390.2	Barley	nucleus	61.82	65.21
Bra009587.1-P	Field mustard	nucleus	22.34	48.59
TraesCS3D01G537400.1	Wheat	nucleus	47.27	48.4
TraesCS3A01G539000.1	Wheat	nucleus	33.77	48.33
TraesCS3A01G532000.1	Wheat	nucleus	46.23	47.85
TraesCS3B01G608800.1	Wheat	nucleus	46.23	47.34
HORVU3Hr1G116220.1	Barley	nucleus, plastid	47.01	45.59
KRH46814	Soybean	nucleus	31.17	32.7
OQU79380	Sorghum	nucleus, vacuole	28.31	32.06
KRG99864	Soybean	nucleus	30.13	31.96
CDY40358	Canola	nucleus	27.01	31.23
HORVU3Hr1G116260.1	Barley	nucleus	24.94	30.48
KRH70477	Soybean	nucleus	29.35	30.46
KXG39680	Sorghum	nucleus	31.17	30.46
KXG37254	Sorghum	nucleus	34.03	30.11
TraesCS3B01G609000.1	Wheat	nucleus	27.01	29.55
TraesCS3B01G609100.1	Wheat	nucleus	26.49	29.39
TraesCS3B01G608900.1	Wheat	nucleus	27.01	29.3
Solyc09g010680.2.1	Tomato	nucleus	30.13	29.15
CDY55549	Canola	nucleus	30.39	29.1
CDY70704	Canola	nucleus	27.53	29.04
Bra005725.1-P	Field mustard	nucleus	30.39	29.03
HORVU3Hr1G116270.2	Barley	nucleus	26.23	29.02
AT5G02460.1	Thale cress	nucleus	29.61	28.57
CDX80822	Canola	nucleus	30.13	28.57
TraesCS3A01G532200.1	Wheat	nucleus	26.23	28.45
Bra028872.1-P	Field mustard	nucleus	29.87	28.33
CDY04855	Canola	nucleus	29.87	28.33
PGSC0003DMT400023033	Potato	nucleus	29.35	28.04
TraesCS3D01G537500.1	Wheat	nucleus	27.79	28.01
CDY55422	Canola	nucleus	28.83	27.68
TraesCS3A01G532100.1	Wheat	nucleus	26.49	26.91
EER97271	Sorghum	nucleus	20.78	22.6
KXG30845	Sorghum	nucleus	17.4	22.04
EER91281	Sorghum	nucleus	21.82	21.82
EES05649	Sorghum	nucleus	16.1	21.02
EES03938	Sorghum	nucleus	18.18	20.9
EES07840	Sorghum	nucleus	16.36	18.53
EES18302	Sorghum	plastid	17.4	18.31
KXG37485	Sorghum	nucleus	17.4	17.63
EES15496	Sorghum	nucleus	15.84	17.23
KXG26925	Sorghum	nucleus	17.14	17.01
KXG31020	Sorghum	nucleus	19.74	16.63
Bra009588.1-P	Field mustard	plastid	5.71	12.36

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A1B6P627	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0046983
InterPro:IPR003851	EnsemblPlants:KXG21095	ProteinID:KXG21095	ProteinID:KXG21095.1	PFAM:PD007478	PFAM:PF02701
ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF59	EnsemblPlantsGene:SORBI_3009G014400	UniParc:UPI00081ADC0D
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:1239933..1242492

Molecular Weight (calculated)

39253.0 Da

IEP (calculated)

9.000

GRAVY (calculated)

-0.484

Length

385 amino acids

Sequence
(BLAST)

001: MIFPPAFLDS SSWNDNQHQH HHQQQQQQQA HHQHQVAANA GGGGGGGDAN HELLQQSIMG GPLPDGGGGG GGGAGGQVVG GPAKPMSMAE RARLARIPLP
101: EPGLKCPRCD STNTKFCYFN NYSLSQPRHF CRACRRYWTR GGALRNVPVG GGYRRHAKRA KPKQQQAAGA GAGGGSAGTG NTATANAALQ HAPAGSTASS
201: AAACTATTTN ALPGGMLGGG GLSMLPPLLR LADFDAMSLG STFSGISSMG KPGSIDAYSH SVGGGGAPAG LEQWRVQQMQ SFPFLHAMDQ GPLGPPLAMA
301: MAAPGMFQLG LDTTSSDNGH GRGGGGGEDG STGGELHVMH QQAATKRESY PAPRGMYGDH HHHLAAAGGY TSAYSTNAAT GNHLL

Best Arabidopsis Sequence Match ( AT3G55370.2 )
(BLAST)

001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF

Arabidopsis Description

OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.