Factsheet for Bra009587.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40358	Canola	nucleus	92.66	49.25
CDY70704	Canola	nucleus	90.4	43.84
Bra028872.1-P	Field mustard	nucleus	84.18	36.7
AT5G02460.1	Thale cress	nucleus	80.79	35.84
Bra005725.1-P	Field mustard	nucleus	81.36	35.73
Bra000008.1-P	Field mustard	nucleus	47.46	28.67
Bra017171.1-P	Field mustard	nucleus	48.02	27.51
Bra005181.1-P	Field mustard	nucleus	49.15	26.77
KRH46814	Soybean	nucleus	50.85	24.52
KRG99864	Soybean	nucleus	49.72	24.24
KRH70477	Soybean	nucleus	50.28	23.99
Os05t0112200-01	Rice	nucleus	38.98	23.79
Bra014752.1-P	Field mustard	nucleus	46.89	23.71
PGSC0003DMT400023033	Potato	nucleus	52.54	23.08
Bra030696.1-P	Field mustard	nucleus	43.5	23.05
Zm00001d035651_P001	Maize	nucleus	47.46	23.01
Solyc09g010680.2.1	Tomato	nucleus	51.41	22.86
HORVU3Hr1G116260.1	Barley	nucleus	40.11	22.54
KXG21095	Sorghum	nucleus	48.59	22.34
Bra007156.1-P	Field mustard	nucleus	40.68	22.02
Os07t0236700-01	Rice	nucleus	43.5	21.81
TraesCS4B01G206800.1	Wheat	nucleus	46.33	21.69
TraesCS4D01G207600.1	Wheat	nucleus	46.33	21.52
Bra035667.1-P	Field mustard	nucleus	41.81	21.51
TraesCS4A01G097800.1	Wheat	nucleus	46.33	21.41
Bra012804.1-P	Field mustard	nucleus	28.81	21.16
Bra031588.1-P	Field mustard	nucleus	37.85	21.14
HORVU1Hr1G005390.2	Barley	nucleus	43.5	21.1
Zm00001d011058_P001	Maize	nucleus	40.11	21.01
HORVU3Hr1G116270.2	Barley	nucleus	41.24	20.98
Bra006923.1-P	Field mustard	nucleus	28.25	20.66
Bra035956.1-P	Field mustard	nucleus	31.07	20.6
Bra020261.1-P	Field mustard	nucleus	27.68	20.59
Bra002504.1-P	Field mustard	nucleus	29.94	20.54
HORVU3Hr1G116220.1	Barley	nucleus, plastid	45.76	20.4
Bra006675.1-P	Field mustard	nucleus	29.94	19.13
Bra035696.1-P	Field mustard	nucleus	27.12	18.75
Bra013003.1-P	Field mustard	nucleus	31.07	18.71
Bra017906.1-P	Field mustard	nucleus	26.55	18.58
Bra012277.1-P	Field mustard	nucleus	26.55	18.01
Bra029352.1-P	Field mustard	nucleus	28.25	17.99
Bra037822.1-P	Field mustard	nucleus	28.81	17.96
Bra031853.1-P	Field mustard	nucleus	29.38	17.11
Bra032891.1-P	Field mustard	nucleus	28.25	16.84
Bra037401.1-P	Field mustard	nucleus	28.25	16.78
Bra010884.1-P	Field mustard	nucleus	27.68	16.61
Bra014418.1-P	Field mustard	nucleus	28.81	16.45
Bra024399.1-P	Field mustard	nucleus	28.25	16.34
Bra030089.1-P	Field mustard	nucleus	27.12	16.11
Bra035873.1-P	Field mustard	nucleus	29.94	15.59
Bra019247.1-P	Field mustard	nucleus	28.81	14.87
Bra010548.1-P	Field mustard	nucleus	29.38	14.77
Bra013758.1-P	Field mustard	nucleus	27.68	14.58
Bra004525.1-P	Field mustard	nucleus	28.81	14.49
Bra000429.1-P	Field mustard	nucleus	29.94	14.36
Bra027722.1-P	Field mustard	nucleus	25.99	14.2
Bra010136.1-P	Field mustard	nucleus	29.38	14.13
Bra039272.1-P	Field mustard	nucleus, plastid	28.25	13.89
Bra009588.1-P	Field mustard	plastid	2.26	2.25

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra009587	EnsemblPlants:Bra009587.1	EnsemblPlants:Bra009587.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:M4CZE0	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF66	UniParc:UPI0002547D14	InterPro:Znf_Dof	SEG:seg	:

Description

AT5G02460 (E=3e-056) | Dof-type zinc finger domain-containing protein

Coordinates

chrA10:+:17328395..17329182

Molecular Weight (calculated)

19328.9 Da

IEP (calculated)

9.933

GRAVY (calculated)

-0.619

Length

177 amino acids

Sequence
(BLAST)

001: MVFSSFPTYP DSSNWQQQHQ PITSTVGFTG NNNNINQQFF PHHPLPPQPQ QTPQPLHHNG NGAGGGGSGG PSGLIRPGSM AERARLANIP LPETALKCPR
101: CDSSNTKFCY FNNYSLTQPR HFCKSCRRYW TCGGALRSVP VGGGCRRNKR TKNSGGCGGS SCWIIPSLWK LNILLDV

Best Arabidopsis Sequence Match ( AT5G02460.1 )
(BLAST)

001: MVFSSFPTYP DHSSNWQQQH QPITTTVGFT GNNINQQFLP HHPLPPQQQQ TPPQLHHNNG NGGVAVPGGP GGLIRPGSMA ERARLANIPL PETALKCPRC
101: DSTNTKFCYF NNYSLTQPRH FCKACRRYWT RGGALRSVPV GGGCRRNKRT KNSSGGGGGS TSSGNSKSQD SATSNDQYHH RAMANNQMGP PSSSSSLSSL
201: LSSYNAGLIP GHDHNSNNNN ILGLGSSLPP LKLMPPLDFT DNFTLQYGAV SAPSYHIGGG SSGGAAALLN GFDQWRFPAT NQLPLGGLDP FDQQHQMEQQ
301: NPGYGLVTGS GQYRPKNIFH NLISSSSSAS SAMVTATASQ LASVKMEDSN NQLNLSRQLF GDEQQLWNIH GAAAASTAAA TSSWSEVSNN FSSSSTSNI

Arabidopsis Description

DOF5.1Dof zinc finger protein DOF5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZ56]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.