Factsheet for Bra012277.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61064	Canola	nucleus	98.85	98.85
CDY00373	Canola	nucleus	93.1	93.46
AT1G21340.1	Thale cress	nucleus	80.84	81.15
Bra017906.1-P	Field mustard	nucleus	78.54	81.03
KRH53419	Soybean	nucleus	34.1	30.8
Bra012804.1-P	Field mustard	nucleus	28.35	30.71
Bra006923.1-P	Field mustard	nucleus	28.35	30.58
Solyc04g070960.1.1	Tomato	nucleus	31.03	30.34
KRH64521	Soybean	nucleus	33.33	30.1
PGSC0003DMT400002060	Potato	nucleus	30.65	30.08
VIT_18s0001g15730.t01	Wine grape	nucleus	32.18	29.89
Bra009587.1-P	Field mustard	nucleus	18.01	26.55
Bra035696.1-P	Field mustard	nucleus	25.29	25.78
Bra020261.1-P	Field mustard	nucleus	23.37	25.63
Bra002504.1-P	Field mustard	nucleus	22.99	23.26
GSMUA_Achr8P32880_001	Banana	nucleus	21.07	22.0
Bra006675.1-P	Field mustard	nucleus	22.99	21.66
Bra013003.1-P	Field mustard	nucleus	23.37	20.75
Bra027722.1-P	Field mustard	nucleus	25.67	20.68
Bra035956.1-P	Field mustard	nucleus	21.07	20.6
Bra013758.1-P	Field mustard	nucleus	26.05	20.24
Bra029352.1-P	Field mustard	nucleus	21.46	20.14
TraesCS1B01G284300.1	Wheat	nucleus	24.14	19.94
EES03938	Sorghum	nucleus	25.29	19.7
Zm00001d042736_P001	Maize	nucleus	24.52	19.69
TraesCS1A01G275000.1	Wheat	nucleus	23.75	19.62
Os01t0865800-00	Rice	nucleus	24.52	19.45
HORVU3Hr1G083460.1	Barley	nucleus	24.52	19.34
TraesCS3A01G377000.1	Wheat	nucleus	24.52	19.34
TraesCS3B01G409600.1	Wheat	nucleus	24.52	19.34
TraesCS3D01G370100.1	Wheat	nucleus	24.52	19.34
Os05t0440000-00	Rice	nucleus	24.14	19.27
Zm00001d038281_P001	Maize	mitochondrion, nucleus	24.14	19.27
Bra019247.1-P	Field mustard	nucleus	24.9	18.95
Bra037401.1-P	Field mustard	nucleus	21.46	18.79
Bra031853.1-P	Field mustard	nucleus	21.84	18.75
Bra010548.1-P	Field mustard	nucleus	25.29	18.75
Bra014418.1-P	Field mustard	nucleus	22.22	18.71
HORVU1Hr1G074140.1	Barley	nucleus, vacuole	24.14	18.31
Bra037822.1-P	Field mustard	nucleus	19.92	18.31
Bra010884.1-P	Field mustard	nucleus	20.69	18.31
Bra035873.1-P	Field mustard	nucleus	23.75	18.24
Bra000008.1-P	Field mustard	nucleus	20.31	18.09
Bra024399.1-P	Field mustard	nucleus	20.69	17.65
Bra032891.1-P	Field mustard	nucleus	19.92	17.51
EES18302	Sorghum	plastid	24.52	17.49
Zm00001d012280_P001	Maize	nucleus	22.61	17.46
Bra030089.1-P	Field mustard	nucleus	19.92	17.45
Bra004525.1-P	Field mustard	nucleus	23.37	17.33
TraesCS1D01G274700.1	Wheat	mitochondrion	24.52	16.98
Bra005181.1-P	Field mustard	nucleus	21.07	16.92
Bra017171.1-P	Field mustard	nucleus	19.92	16.83
Bra039272.1-P	Field mustard	nucleus, plastid	22.99	16.67
Bra010136.1-P	Field mustard	nucleus	23.37	16.58
Bra000429.1-P	Field mustard	nucleus	23.37	16.53
Bra014752.1-P	Field mustard	nucleus	21.07	15.71
Bra030696.1-P	Field mustard	nucleus	19.92	15.57
Bra007156.1-P	Field mustard	nucleus	19.16	15.29
Bra035667.1-P	Field mustard	nucleus	18.77	14.24
Bra005725.1-P	Field mustard	nucleus	21.46	13.9
Bra028872.1-P	Field mustard	nucleus	20.69	13.3
Bra031588.1-P	Field mustard	nucleus	16.09	13.25
Bra009588.1-P	Field mustard	plastid	3.07	4.49

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra012277	EnsemblPlants:Bra012277.1	EnsemblPlants:Bra012277.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:M4D717	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF73	UniParc:UPI000254151B	InterPro:Znf_Dof	SEG:seg	:

Description

AT1G21340 (E=1e-111) | Dof-type zinc finger domain-containing protein

Coordinates

chrA07:-:8877853..8878638

Molecular Weight (calculated)

29158.5 Da

IEP (calculated)

4.755

GRAVY (calculated)

-0.697

Length

261 amino acids

Sequence
(BLAST)

001: MFPYTAHNVC QRQFPSPEIE IPAKWKISYG HEETAPPCPR CASSNTKFCY YNNYSLSQPR YFCKGCRRYW TKGGSLRNIP VGGGCRKRSR SRRQSIHKRF
101: GPNENLPDGL ISGSQSSPAG SDIDLAAVFA QYVNAPSPSS TDNTTGSDQD SPVTTTTTTT NTHALNSLSW DICQETDVNL GFYGEFNDLT NKIQEDERGV
201: GHFLQEDQEE IFEFQGLLDD KDIQEILECS FSEEPDQLIS QGSFMINGGH WSSTDLTTFG V

Best Arabidopsis Sequence Match ( AT1G21340.1 )
(BLAST)

001: MLPYIGHNSY QQHQFPLPEM EIPEKWKLSY EQEAITAPAC PRCASSNTKF CYYNNYSLSQ PRYFCKGCRR YWTKGGSLRN IPVGGGCRKR SRSRQNSHKR
101: FGRNENRPDG LINQDDGFQS SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG SDQDSPITTT THALESLSWD ICQETDVDLG FYGEFNNLTQ KTKEDQEVFG
201: QFLQEDREEI FEFQGLLDDK EIQEILECSF SEEPDQLVSQ GSFMINGDNW SSTDLTRFGI

Arabidopsis Description

DOF1.2Dof zinc finger protein DOF1.2 [Source:UniProtKB/Swiss-Prot;Acc:P68349]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.