Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P30470_001 | Banana | nucleus | 21.2 | 32.92 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 23.6 | 32.6 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 25.2 | 28.12 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 28.4 | 27.63 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 32.0 | 26.85 |
| GSMUA_Achr11P... | Banana | nucleus | 29.2 | 26.84 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 28.0 | 26.32 |
| GSMUA_Achr11P... | Banana | nucleus | 30.8 | 26.19 |
| GSMUA_Achr11P... | Banana | nucleus | 27.2 | 25.66 |
| GSMUA_Achr10P... | Banana | nucleus | 27.6 | 25.37 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 28.4 | 25.36 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 27.6 | 24.91 |
| GSMUA_Achr10P... | Banana | nucleus | 28.8 | 24.83 |
| PGSC0003DMT400002060 | Potato | nucleus | 26.4 | 24.81 |
| Solyc04g070960.1.1 | Tomato | nucleus | 26.4 | 24.72 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 28.8 | 24.66 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 26.8 | 24.63 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 24.0 | 24.29 |
| GSMUA_Achr10P... | Banana | nucleus | 27.6 | 24.21 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 18.8 | 24.1 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 26.4 | 24.09 |
| GSMUA_Achr11P... | Banana | nucleus | 28.4 | 23.99 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 23.6 | 23.89 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 21.2 | 23.87 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 25.6 | 23.7 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 26.0 | 23.05 |
| KRH53419 | Soybean | nucleus | 26.4 | 22.84 |
| KRH64521 | Soybean | nucleus | 26.4 | 22.84 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 23.6 | 22.78 |
| Zm00001d042736_P001 | Maize | nucleus | 29.6 | 22.77 |
| Os05t0440000-00 | Rice | nucleus | 29.6 | 22.63 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 19.6 | 22.58 |
| Bra017906.1-P | Field mustard | nucleus | 22.8 | 22.53 |
| TraesCS1A01G275000.1 | Wheat | nucleus | 28.4 | 22.47 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 28.4 | 22.47 |
| EES03938 | Sorghum | nucleus | 30.0 | 22.39 |
| Os01t0865800-00 | Rice | nucleus | 29.2 | 22.19 |
| CDY50231 | Canola | nucleus | 22.4 | 22.13 |
| GSMUA_Achr10P... | Banana | nucleus | 22.8 | 22.09 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 29.2 | 22.05 |
| CDY04620 | Canola | nucleus | 22.4 | 22.05 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 25.6 | 21.99 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 29.2 | 21.99 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 29.6 | 21.76 |
| TraesCS3A01G377000.1 | Wheat | nucleus | 28.8 | 21.75 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 28.8 | 21.75 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 28.8 | 21.75 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 24.4 | 21.71 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 20.4 | 21.52 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 28.0 | 21.41 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 22.0 | 21.4 |
| GSMUA_Achr10P... | Banana | nucleus | 24.8 | 21.23 |
| CDY00373 | Canola | nucleus | 22.0 | 21.15 |
| AT1G21340.1 | Thale cress | nucleus | 22.0 | 21.15 |
| CDY61064 | Canola | nucleus | 22.0 | 21.07 |
| Bra012277.1-P | Field mustard | nucleus | 22.0 | 21.07 |
| Zm00001d012280_P001 | Maize | nucleus | 28.4 | 21.01 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 27.6 | 20.91 |
| GSMUA_Achr10P... | Banana | nucleus | 28.0 | 20.77 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 28.4 | 20.64 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 25.2 | 20.52 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 27.2 | 20.48 |
| GSMUA_Achr11P... | Banana | nucleus | 28.8 | 20.06 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 29.2 | 20.05 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 22.0 | 20.0 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 28.8 | 19.89 |
| EES18302 | Sorghum | plastid | 28.8 | 19.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.6 | 19.35 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 23.2 | 18.95 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 22.8 | 18.87 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 21.2 | 18.6 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 28.0 | 18.57 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 23.2 | 18.3 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 22.8 | 17.48 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 23.6 | 17.2 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 24.0 | 16.9 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 28.8 | 16.67 |
| GSMUA_Achr10P... | Banana | nucleus | 23.2 | 16.67 |
Protein Annotations
| MapMan:15.5.1.5 | InterPro:4Fe4S_Fe-S-bd | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr8G32880_001 | EnsemblPlants:GSMUA_Achr8P32880_001 |
| EnsemblPlants:GSMUA_Achr8T32880_001 | InterPro:IPR003851 | InterPro:IPR017896 | UniProt:M0TVP0 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PFscan:PS51379 | PANTHER:PTHR31992 | UniParc:UPI000295F2DD | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G32880_001]
Coordinates
chr8:+:34115097..34115849
Molecular Weight (calculated)
27432.0 Da
IEP (calculated)
6.331
GRAVY (calculated)
-0.547
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MHMHHQSPTA LKDDVPPSFA PFFPSMSASR HGLAPCAHGR SKPHVELSPR CPRCGSCDTK FCYYNNYSLS QPRYFCKGCR RYWTMGGSLR NVPVGGSSRT
101: NRRRMPSRVS GAPPVAREPS YGHQPQNHGT EGSVDLAALY ATFSSRCPQL EPGLVVPGLP EDIDSVSGSI VDHAECQGSI TEPIGEGFLD QMNQQCLIGE
201: LDPNNTFDTL PSPLEIANYY SSDLSNAPDF VSEANMYPSL DHNFPSSDWC
101: NRRRMPSRVS GAPPVAREPS YGHQPQNHGT EGSVDLAALY ATFSSRCPQL EPGLVVPGLP EDIDSVSGSI VDHAECQGSI TEPIGEGFLD QMNQQCLIGE
201: LDPNNTFDTL PSPLEIANYY SSDLSNAPDF VSEANMYPSL DHNFPSSDWC
001: MERAEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKSRRP KSSSGNNTKT SLTANSGNPG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.